RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 MAGED2Q9UNF1 606 aaPredicted RBP13.28□□□□□ -0.28
HDAC8-217ENST00000478743 AK5Q9Y6K8 562 aa13.28□□□□□ -0.28
HDAC8-217ENST00000478743 CABIN1Q9Y6J0 2220 aa13.28□□□□□ -0.28
HDAC8-217ENST00000478743 A0A1W2PQF6 199 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 C2orf78A6NCI8 922 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 CBX4O00257 560 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 FLRT2O43155 660 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 CCNT1O60563 726 aaKnown RBP13.27□□□□□ -0.29
HDAC8-217ENST00000478743 KAT7O95251 611 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 HAPLN1P10915 354 aaPredicted RBP13.27□□□□□ -0.29
HDAC8-217ENST00000478743 ATP2B1P20020 1258 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 DDX6P26196 483 aaKnown RBP eCLIP13.27□□□□□ -0.29
HDAC8-217ENST00000478743 HLA-BQ31612 363 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 SLC10A6Q3KNW5 377 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 ARHGAP40Q5TG30 622 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 USP37Q86T82 979 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 ERICH1Q86X53 443 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 PHTF2Q8N3S3 785 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 ARL14EPQ8N8R7 260 aaPredicted RBP13.27□□□□□ -0.29
HDAC8-217ENST00000478743 CCDC26Q8TAB7 109 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 LRRC15Q8TF66 581 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 CDC6Q99741 560 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 ACO2Q99798 780 aaKnown RBP13.27□□□□□ -0.29
HDAC8-217ENST00000478743 C22orf23Q9BZE7 217 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 ZCWPW1Q9H0M4 648 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 ANKMY1Q9P2S6 941 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 NXF1Q9UBU9 619 aaKnown RBP13.27□□□□□ -0.29
HDAC8-217ENST00000478743 IL17BQ9UHF5 180 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 TCHHQ07283 1943 aa13.27□□□□□ -0.29
HDAC8-217ENST00000478743 BRINP1O60477 761 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 CKMP06732 381 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 ZNF883P0CG24 379 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 SCN1AP35498 2009 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 MATKP42679 507 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 KCNH2Q12809 1159 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 FLNCQ14315 2725 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 TAF12Q16514 161 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 DSTYKQ6XUX3 929 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 NEK8Q86SG6 692 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 ZNF513Q8N8E2 541 aaPredicted RBP13.26□□□□□ -0.29
HDAC8-217ENST00000478743 MCPH1Q8NEM0 835 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 BAP1Q92560 729 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 MRPS31Q92665 395 aaKnown RBP13.26□□□□□ -0.29
HDAC8-217ENST00000478743 NAF1Q96HR8 494 aaKnown RBP13.26□□□□□ -0.29
HDAC8-217ENST00000478743 ZBTB45Q96K62 511 aaPredicted RBP13.26□□□□□ -0.29
HDAC8-217ENST00000478743 TARS2Q9BW92 718 aaKnown RBP13.26□□□□□ -0.29
HDAC8-217ENST00000478743 ZDHHC5Q9C0B5 715 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 SH3GLB2Q9NR46 395 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 TMLHEQ9NVH6 421 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 GCNT4Q9P109 453 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 HSFX1Q9UBD0 423 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 KCNJ14Q9UNX9 436 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 BOD1L1Q8NFC6 3051 aa13.26□□□□□ -0.29
HDAC8-217ENST00000478743 CCDC196A0A1B0GTZ2 297 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 WNT7AO00755 349 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 TNFSF14O43557 240 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 DTNBO60941 627 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 NFATC1O95644 943 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 SPATA31C1P0DKV0 1188 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 PROZP22891 400 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 LRPAP1P30533 357 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 TUFMP49411 452 aaKnown RBP13.25□□□□□ -0.29
HDAC8-217ENST00000478743 NFKB2Q00653 900 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 AKAP17AQ02040 695 aaKnown RBP13.25□□□□□ -0.29
HDAC8-217ENST00000478743 USP49Q70CQ1 688 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 TMPRSS12Q86WS5 348 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 BRF1Q92994 677 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 WBP1Q96G27 269 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 PNKPQ96T60 521 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 ACOX2Q99424 681 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 KIF2CQ99661 725 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 OXCT2Q9BYC2 517 aaPredicted RBP13.25□□□□□ -0.29
HDAC8-217ENST00000478743 MIR1-1HGQ9H1L0 117 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 FAM124BQ9H5Z6 455 aaPredicted RBP13.25□□□□□ -0.29
HDAC8-217ENST00000478743 ABI2Q9NYB9 513 aaPredicted RBP13.25□□□□□ -0.29
HDAC8-217ENST00000478743 SUSD2Q9UGT4 822 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 ZMYM5Q9UJ78 669 aa13.25□□□□□ -0.29
HDAC8-217ENST00000478743 A0A1B0GTW7 788 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 A0A1B0GVT2 93 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 KCNK3O14649 394 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 CER1O95813 267 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 APODP05090 189 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 CXCL8P10145 99 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 HOXB2P14652 356 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 IFNAR1P17181 557 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 TYMPP19971 482 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 ADSSP30520 456 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 TNFSF9P41273 254 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 RHDQ02161 417 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 NR1H3Q13133 447 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 TARDBPQ13148 414 aaKnown RBP eCLIP13.24□□□□□ -0.29
HDAC8-217ENST00000478743 RTP5Q14D33 572 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 CCDC142Q17RM4 750 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 HSF5Q4G112 596 aaPredicted RBP13.24□□□□□ -0.29
HDAC8-217ENST00000478743 PKDCCQ504Y2 493 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 C6orf118Q5T5N4 469 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 ARMCX5Q6P1M9 558 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 LAYNQ6UX15 382 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 FILIP1Q7Z7B0 1213 aa13.24□□□□□ -0.29
HDAC8-217ENST00000478743 OXER1Q8TDS5 423 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms