RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 LIMS2Q7Z4I7 341 aa16.9■□□□□ 0.3
GARNL3-215ENST00000478702 LONP2Q86WA8 852 aa16.9■□□□□ 0.3
GARNL3-215ENST00000478702 ADGRF2Q8IZF7 708 aa16.9■□□□□ 0.3
GARNL3-215ENST00000478702 ATAD1Q8NBU5 361 aa16.9■□□□□ 0.3
GARNL3-215ENST00000478702 TTC8Q8TAM2 541 aa16.9■□□□□ 0.3
GARNL3-215ENST00000478702 SPATA20Q8TB22 786 aa16.9■□□□□ 0.3
GARNL3-215ENST00000478702 ZFYVE19Q96K21 471 aa16.9■□□□□ 0.3
GARNL3-215ENST00000478702 C8orf33Q9H7E9 229 aaPredicted RBP16.9■□□□□ 0.3
GARNL3-215ENST00000478702 RMND1Q9NWS8 449 aa16.9■□□□□ 0.3
GARNL3-215ENST00000478702 GTSE1Q9NYZ3 720 aa16.9■□□□□ 0.3
GARNL3-215ENST00000478702 R3HCC1Q9Y3T6 440 aaKnown RBP16.9■□□□□ 0.3
GARNL3-215ENST00000478702 NUP205Q92621 2012 aa16.89■□□□□ 0.29
GARNL3-215ENST00000478702 LRRIQ3A6PVS8 624 aaPredicted RBP16.89■□□□□ 0.29
GARNL3-215ENST00000478702 KPNA1P52294 538 aaPredicted RBP16.89■□□□□ 0.29
GARNL3-215ENST00000478702 TSPY1Q01534 308 aa16.89■□□□□ 0.29
GARNL3-215ENST00000478702 SMARCB1Q12824 385 aa16.89■□□□□ 0.29
GARNL3-215ENST00000478702 LRRC32Q14392 662 aa16.89■□□□□ 0.29
GARNL3-215ENST00000478702 SOWAHAQ2M3V2 549 aa16.89■□□□□ 0.29
GARNL3-215ENST00000478702 OSTM1Q86WC4 334 aa16.89■□□□□ 0.29
GARNL3-215ENST00000478702 YAF2Q8IY57 180 aa16.89■□□□□ 0.29
GARNL3-215ENST00000478702 SMYD4Q8IYR2 804 aaPredicted RBP16.89■□□□□ 0.29
GARNL3-215ENST00000478702 SPPL2BQ8TCT7 592 aa16.89■□□□□ 0.29
GARNL3-215ENST00000478702 PARD3BQ8TEW8 1205 aa16.89■□□□□ 0.29
GARNL3-215ENST00000478702 C2orf15Q8WU43 125 aaKnown RBP16.89■□□□□ 0.29
GARNL3-215ENST00000478702 ZNF516Q92618 1163 aa16.89■□□□□ 0.29
GARNL3-215ENST00000478702 GSDMAQ96QA5 445 aa16.89■□□□□ 0.29
GARNL3-215ENST00000478702 DDX43Q9NXZ2 648 aaKnown RBP16.89■□□□□ 0.29
GARNL3-215ENST00000478702 CHMP5Q9NZZ3 219 aa16.89■□□□□ 0.29
GARNL3-215ENST00000478702 MAPK8IP1Q9UQF2 711 aa16.89■□□□□ 0.29
GARNL3-215ENST00000478702 SLC27A5Q9Y2P5 690 aa16.89■□□□□ 0.29
GARNL3-215ENST00000478702 GABRDO14764 452 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 MAPK13O15264 365 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 SOAT2O75908 522 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 SMC2O95347 1197 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 STAU1O95793 577 aaKnown RBP16.88■□□□□ 0.29
GARNL3-215ENST00000478702 NR2F2P24468 414 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 CNR2P34972 360 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 AP3M2P53677 418 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 EPHB3P54753 998 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 MYL7Q01449 175 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 CCINQ13939 588 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 PON2Q15165 354 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 COBLL1Q53SF7 1204 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 INTS6LQ5JSJ4 861 aaKnown RBP16.88■□□□□ 0.29
GARNL3-215ENST00000478702 TDRD10Q5VZ19 366 aaKnown RBP16.88■□□□□ 0.29
GARNL3-215ENST00000478702 CEP135Q66GS9 1140 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 HEATR6Q6AI08 1181 aaKnown RBP16.88■□□□□ 0.29
GARNL3-215ENST00000478702 C1orf228Q6PIY5 440 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 DPH6Q7L8W6 267 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.88■□□□□ 0.29
GARNL3-215ENST00000478702 LRRTM3Q86VH5 581 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 ELOA2Q8IYF1 753 aaPredicted RBP16.88■□□□□ 0.29
GARNL3-215ENST00000478702 DCP1BQ8IZD4 617 aaKnown RBP16.88■□□□□ 0.29
GARNL3-215ENST00000478702 FAM160A2Q8N612 972 aaPredicted RBP16.88■□□□□ 0.29
GARNL3-215ENST00000478702 TMC2Q8TDI7 906 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 KBTBD7Q8WVZ9 684 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 PKMYT1Q99640 499 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 ACBD6Q9BR61 282 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 HOOK1Q9UJC3 728 aaKnown RBP16.88■□□□□ 0.29
GARNL3-215ENST00000478702 FRMD4BQ9Y2L6 1034 aa16.88■□□□□ 0.29
GARNL3-215ENST00000478702 GADD45BO75293 160 aaPredicted RBP16.87■□□□□ 0.29
GARNL3-215ENST00000478702 PRAMEF12O95522 483 aa16.87■□□□□ 0.29
GARNL3-215ENST00000478702 ATF6P18850 670 aa16.87■□□□□ 0.29
GARNL3-215ENST00000478702 ALDH1A3P47895 512 aa16.87■□□□□ 0.29
GARNL3-215ENST00000478702 LHX1P48742 406 aa16.87■□□□□ 0.29
GARNL3-215ENST00000478702 EDRF1Q3B7T1 1238 aa16.87■□□□□ 0.29
GARNL3-215ENST00000478702 ARHGAP29Q52LW3 1261 aa16.87■□□□□ 0.29
GARNL3-215ENST00000478702 DGKKQ5KSL6 1271 aa16.87■□□□□ 0.29
GARNL3-215ENST00000478702 ZNF658Q5TYW1 1059 aaPredicted RBP16.87■□□□□ 0.29
GARNL3-215ENST00000478702 DNAJB7Q7Z6W7 309 aaPredicted RBP16.87■□□□□ 0.29
GARNL3-215ENST00000478702 RALGPS2Q86X27 583 aaPredicted RBP16.87■□□□□ 0.29
GARNL3-215ENST00000478702 ERCC4Q92889 916 aaPredicted RBP16.87■□□□□ 0.29
GARNL3-215ENST00000478702 PSMG2Q969U7 264 aa16.87■□□□□ 0.29
GARNL3-215ENST00000478702 XYLT2Q9H1B5 865 aa16.87■□□□□ 0.29
GARNL3-215ENST00000478702 ATXN3LQ9H3M9 355 aa16.87■□□□□ 0.29
GARNL3-215ENST00000478702 TMLHEQ9NVH6 421 aa16.87■□□□□ 0.29
GARNL3-215ENST00000478702 ABI2Q9NYB9 513 aaPredicted RBP16.87■□□□□ 0.29
GARNL3-215ENST00000478702 PCDHA5Q9Y5H7 936 aa16.87■□□□□ 0.29
GARNL3-215ENST00000478702 HELZP42694 1942 aaKnown RBP16.86■□□□□ 0.29
GARNL3-215ENST00000478702 HCRTO43612 131 aa16.86■□□□□ 0.29
GARNL3-215ENST00000478702 AKAP3O75969 853 aa16.86■□□□□ 0.29
GARNL3-215ENST00000478702 CST3P01034 146 aaPredicted RBP16.86■□□□□ 0.29
GARNL3-215ENST00000478702 WARSP23381 471 aaKnown RBP16.86■□□□□ 0.29
GARNL3-215ENST00000478702 ACAT1P24752 427 aaKnown RBP16.86■□□□□ 0.29
GARNL3-215ENST00000478702 GABRR2P28476 465 aa16.86■□□□□ 0.29
GARNL3-215ENST00000478702 PCSK1P29120 753 aa16.86■□□□□ 0.29
GARNL3-215ENST00000478702 ATICP31939 592 aa16.86■□□□□ 0.29
GARNL3-215ENST00000478702 TUFMP49411 452 aaKnown RBP16.86■□□□□ 0.29
GARNL3-215ENST00000478702 MYL6P60660 151 aa16.86■□□□□ 0.29
GARNL3-215ENST00000478702 DLG4P78352 724 aa16.86■□□□□ 0.29
GARNL3-215ENST00000478702 TNK2Q07912 1038 aa16.86■□□□□ 0.29
GARNL3-215ENST00000478702 BIRC3Q13489 604 aa16.86■□□□□ 0.29
GARNL3-215ENST00000478702 NFE2Q16621 373 aaPredicted RBP16.86■□□□□ 0.29
GARNL3-215ENST00000478702 ST3GAL2Q16842 350 aa16.86■□□□□ 0.29
GARNL3-215ENST00000478702 GPR158Q5T848 1215 aa16.86■□□□□ 0.29
GARNL3-215ENST00000478702 PKN3Q6P5Z2 889 aa16.86■□□□□ 0.29
GARNL3-215ENST00000478702 WDR5BQ86VZ2 330 aa16.86■□□□□ 0.29
GARNL3-215ENST00000478702 SMARCE1Q969G3 411 aa16.86■□□□□ 0.29
GARNL3-215ENST00000478702 SYAP1Q96A49 352 aaPredicted RBP16.86■□□□□ 0.29
GARNL3-215ENST00000478702 SEPT5Q99719 369 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms