RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 ASGR2P07307 311 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 TPM2P07951 284 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 FAM163BP0C2L3 166 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 TBXAS1P24557 533 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-215ENST00000478531 CACNA2D1P54289 1103 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 YWHAEP62258 255 aaKnown RBP7.33□□□□□ -1.24
BRCA1-215ENST00000478531 RPL10AP62906 217 aaKnown RBP7.33□□□□□ -1.24
BRCA1-215ENST00000478531 KRT31Q15323 416 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 EXOC3L4Q17RC7 722 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 VWA3BQ502W6 1294 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 MIIPQ5JXC2 388 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 CDKAL1Q5VV42 579 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 TRIM65Q6PJ69 517 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 GBP6Q6ZN66 633 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 DNAJB7Q7Z6W7 309 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-215ENST00000478531 RNF135Q8IUD6 432 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 EHBP1Q8NDI1 1231 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 LMO3Q8TAP4 145 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 WHAMMQ8TF30 809 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 FGF13Q92913 245 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 SMARCD1Q96GM5 515 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 HEXIM2Q96MH2 286 aaKnown RBP7.33□□□□□ -1.24
BRCA1-215ENST00000478531 DNAI2Q9GZS0 605 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 VPS16Q9H269 839 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 NDST4Q9H3R1 872 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 TMEM30AQ9NV96 361 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.33□□□□□ -1.247e-7■□□□□ 9.9
BRCA1-215ENST00000478531 LIMD1Q9UGP4 676 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 MUTYHQ9UIF7 546 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 USTQ9Y2C2 406 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 ASB3Q9Y575 518 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 WDR87Q6ZQQ6 2873 aa7.33□□□□□ -1.24
BRCA1-215ENST00000478531 SLC38A8A6NNN8 435 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 TNFRSF10AO00220 468 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 DLL1O00548 723 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 ZNF197O14709 1029 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 TRIM66O15016 1216 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 KRT5P13647 590 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 CD19P15391 556 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 SLC9A1P19634 815 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 GABRR2P28476 465 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 MAGEA11P43364 429 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 ZNF165P49910 485 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 CYP4F8P98187 520 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 TEAD2Q15562 447 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 PRSS36Q5K4E3 855 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 STXBP5Q5T5C0 1151 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 PHLDB3Q6NSJ2 640 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 GJB7Q6PEY0 223 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 TMEM270Q6UE05 265 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 VSTM1Q6UX27 236 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 TMC8Q8IU68 726 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 NPAS3Q8IXF0 933 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 FUKQ8N0W3 1084 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 SLC4A11Q8NBS3 891 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 ANKRD20A12PQ8NF67 263 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 SHKBP1Q8TBC3 707 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 MCRS1Q96EZ8 462 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 GCNAQ96QF7 691 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 FUCA2Q9BTY2 467 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 ATXN3LQ9H3M9 355 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 UBE2TQ9NPD8 197 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-215ENST00000478531 CDH7Q9ULB5 785 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 PCDHB4Q9Y5E5 795 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 ZDBF2Q9HCK1 2354 aa7.32□□□□□ -1.24
BRCA1-215ENST00000478531 BECN2A8MW95 431 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 CALCAP01258 141 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 FAM200BP0CF97 657 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 CSH1P0DML2 217 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 CSH2P0DML3 217 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 LAMP2P13473 410 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 ATP1A3P13637 1013 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 RAD23BP54727 409 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 MAP3K7CLP57077 242 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 NCAPHQ15003 741 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 ARHGAP44Q17R89 818 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 PPP1R26Q5T8A7 1209 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-215ENST00000478531 DENND5BQ6ZUT9 1274 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 GAREM2Q75VX8 874 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 DHX40Q8IX18 779 aaKnown RBP7.31□□□□□ -1.24
BRCA1-215ENST00000478531 CRYBG2Q8N1P7 616 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 TTC39CQ8N584 583 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 LEMD2Q8NC56 503 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 RSAD2Q8WXG1 361 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 KHSRPQ92945 711 aaKnown RBP eCLIP7.31□□□□□ -1.244e-9■■■□□ 15.2
BRCA1-215ENST00000478531 CYFIP2Q96F07 1278 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 TMEM176AQ96HP8 235 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 FAXDC2Q96IV6 333 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 KREMEN1Q96MU8 473 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 KCNK16Q96T55 309 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 DMAP1Q9NPF5 467 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-215ENST00000478531 APEX2Q9UBZ4 518 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 GTPBP10A4D1E9 387 aaKnown RBP7.31□□□□□ -1.24
BRCA1-215ENST00000478531 BEST1O76090 585 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 HMGA1P17096 107 aaKnown RBP7.31□□□□□ -1.24
BRCA1-215ENST00000478531 PON1P27169 355 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 CDC25CP30307 473 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 USP8P40818 1118 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 EPHA5P54756 1037 aa7.31□□□□□ -1.24
BRCA1-215ENST00000478531 MFAP3P55082 362 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms