RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 SLC27A1Q6PCB7 646 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 WDR59Q6PJI9 974 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 SPOCD1Q6ZMY3 1216 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 EFHBQ8N7U6 833 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 FRMD8Q9BZ67 464 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-208ENST00000478423 FAM129AQ9BZQ8 928 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 XAB2Q9HCS7 855 aaKnown RBP14.81□□□□□ -0.04
NPHP4-208ENST00000478423 C20orf96Q9NUD7 363 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-208ENST00000478423 ANGPTL2Q9UKU9 493 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 KNDC1Q76NI1 1749 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 A0A0U1RQJ8 604 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 GSTA4O15217 222 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 PJA2O43164 708 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 PSMD3O43242 534 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 CCDC22O60826 627 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 LGALS2P05162 132 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 GFAPP14136 432 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 GLRA2P23416 452 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 SPRP35270 261 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-208ENST00000478423 ALDH7A1P49419 539 aaKnown RBP14.8□□□□□ -0.04
NPHP4-208ENST00000478423 MROH9Q5TGP6 573 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 SUDS3Q9H7L9 328 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-208ENST00000478423 USP15Q9Y4E8 981 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-208ENST00000478423 USH1CQ9Y6N9 552 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 PMPCBO75439 489 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 PRKCIP41743 596 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 PTENP60484 403 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 STX3Q13277 289 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 CCNG2Q16589 344 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 COBLL1Q53SF7 1204 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 EPS8L1Q8TE68 723 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 TMEM169Q96HH4 297 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 FAM161BQ96MY7 647 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 ZBTB18Q99592 522 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 NPHS2Q9NP85 383 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 NOP53Q9NZM5 478 aaKnown RBP14.8□□□□□ -0.04
NPHP4-208ENST00000478423 ITGA11Q9UKX5 1188 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 CASTOR2A6NHX0 329 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 LACTBL1A8MY62 500 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 MAP3K7O43318 606 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 CYBBP04839 570 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 HSPA8P11142 646 aaKnown RBP14.8□□□□□ -0.04
NPHP4-208ENST00000478423 PYGMP11217 842 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 PPIL2Q13356 520 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 PDK2Q15119 407 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 NT5DC3Q86UY8 548 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 SLC25A41Q8N5S1 370 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 STAMBPL1Q96FJ0 436 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 ECT2Q9H8V3 914 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 PCDHB7Q9Y5E2 793 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 E2F8A0AVK6 867 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 PPFIA2O75334 1257 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 F9P00740 461 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 C4orf22Q6V702 233 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 RIBC1Q8N443 379 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-208ENST00000478423 SH3TC2Q8TF17 1288 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 KLRG1Q96E93 195 aa14.8□□□□□ -0.04
NPHP4-208ENST00000478423 MANSC4A6NHS7 340 aaPredicted RBP14.79□□□□□ -0.04
NPHP4-208ENST00000478423 TRIM49D1C9J1S8 452 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 ADRB2P07550 413 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 ITGB3BPQ13352 177 aaPredicted RBP14.79□□□□□ -0.04
NPHP4-208ENST00000478423 ARSHQ5FYA8 562 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 NAPEPLDQ6IQ20 393 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 EPS8L3Q8TE67 593 aaKnown RBP14.79□□□□□ -0.04
NPHP4-208ENST00000478423 VCPIP1Q96JH7 1222 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 SERPINB12Q96P63 405 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 AP4E1Q9UPM8 1137 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 ROBO3Q96MS0 1386 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 CHUKO15111 745 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 MAP3K7CLP57077 242 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 KRT33BQ14525 404 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 SNX17Q15036 470 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 ANKRD20A4Q4UJ75 823 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 ANKRD20A8PQ5CZ79 823 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 ANKRD20A2Q5SQ80 823 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 ANKRD20A1Q5TYW2 823 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 TAF2Q6P1X5 1199 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 LVRNQ6Q4G3 990 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 SLFN11Q7Z7L1 901 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 IRF2BP1Q8IU81 584 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 STKLD1Q8NE28 680 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 CCDC124Q96CT7 223 aaKnown RBP14.79□□□□□ -0.04
NPHP4-208ENST00000478423 RPRD1AQ96P16 312 aaPredicted RBP14.79□□□□□ -0.04
NPHP4-208ENST00000478423 CDC42EP4Q9H3Q1 356 aaKnown RBP14.79□□□□□ -0.04
NPHP4-208ENST00000478423 ARHGEF38Q9NXL2 777 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 RPS6KL1Q9Y6S9 549 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 DLG5Q8TDM6 1919 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 ACAT1P24752 427 aaKnown RBP14.79□□□□□ -0.04
NPHP4-208ENST00000478423 DDX27Q96GQ7 796 aaKnown RBP14.79□□□□□ -0.04
NPHP4-208ENST00000478423 RMDN2Q96LZ7 410 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 KRT82Q9NSB4 513 aa14.79□□□□□ -0.04
NPHP4-208ENST00000478423 AFF4Q9UHB7 1163 aaKnown RBP14.79□□□□□ -0.04
NPHP4-208ENST00000478423 LTN1O94822 1766 aa14.78□□□□□ -0.04
NPHP4-208ENST00000478423 GHRP10912 638 aa14.78□□□□□ -0.04
NPHP4-208ENST00000478423 ETFBP38117 255 aa14.78□□□□□ -0.04
NPHP4-208ENST00000478423 TWF1Q12792 350 aa14.78□□□□□ -0.04
NPHP4-208ENST00000478423 CELF3Q5SZQ8 465 aaKnown RBP14.78□□□□□ -0.04
NPHP4-208ENST00000478423 CREG2Q8IUH2 290 aa14.78□□□□□ -0.04
NPHP4-208ENST00000478423 TMEM106CQ9BVX2 250 aa14.78□□□□□ -0.04
NPHP4-208ENST00000478423 COLEC11Q9BWP8 271 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms