RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 RABGAP1LQ5R372 815 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 AAGABQ6PD74 315 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 Q6ZNX1 250 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 C3orf62Q6ZUJ4 267 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 DENND5BQ6ZUT9 1274 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 SH2D5Q6ZV89 423 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 C16orf86Q6ZW13 317 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 ZNF720Q7Z2F6 126 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 HPS6Q86YV9 775 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 CPNE9Q8IYJ1 553 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 BBS5Q8N3I7 341 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 PIP4K2CQ8TBX8 421 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 PPP4R1Q8TF05 950 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 DDX1Q92499 740 aaKnown RBP10.29□□□□□ -0.76
COL13A1-207ENST00000478219 ACSF2Q96CM8 615 aaPredicted RBP10.29□□□□□ -0.76
COL13A1-207ENST00000478219 CCDC97Q96F63 343 aaPredicted RBP10.29□□□□□ -0.76
COL13A1-207ENST00000478219 CSRNP1Q96S65 589 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 SRPK1Q96SB4 655 aaKnown RBP10.29□□□□□ -0.76
COL13A1-207ENST00000478219 CYP4F11Q9HBI6 524 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 ZNF148Q9UQR1 794 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 DMTF1Q9Y222 760 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 USTQ9Y2C2 406 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 RABGAP1Q9Y3P9 1069 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 AK5Q9Y6K8 562 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 ABCA3Q99758 1704 aa10.29□□□□□ -0.76
COL13A1-207ENST00000478219 TMEM247A6NEH6 219 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 LIASO43766 372 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 ADCY3O60266 1144 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 FAM155BO75949 473 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 RBP3P10745 1247 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 PORP16435 677 aaPredicted RBP10.28□□□□□ -0.76
COL13A1-207ENST00000478219 SSTR3P32745 418 aaPredicted RBP10.28□□□□□ -0.76
COL13A1-207ENST00000478219 GJA8P48165 433 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 ENTPD1P49961 510 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 MTTPP55157 894 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 DNAL1Q4LDG9 190 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 ELMSAN1Q6PJG2 1045 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 CLEC4GQ6UXB4 293 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 AMIGO2Q86SJ2 522 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 LARGE2Q8N3Y3 721 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 MARVELD2Q8N4S9 558 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 GRIN3AQ8TCU5 1115 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 CPA5Q8WXQ8 436 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 PPP1R14BQ96C90 147 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 ABHD8Q96I13 439 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 ANO3Q9BYT9 981 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 C17orf75Q9HAS0 396 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 PRDM11Q9NQV5 511 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 SPATA7Q9P0W8 599 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 TCRBV7S3A2A0A539 114 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 KANSL1LA0AUZ9 987 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 hCG_1984214I3L0E3 225 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 EIF3DO15371 548 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL13A1-207ENST00000478219 SERPINB7O75635 380 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 IFNB1P01574 187 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 SLURP2P0DP57 97 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 FAAP100Q0VG06 881 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 PDK1Q15118 436 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 ACAD10Q6JQN1 1059 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 CHSY1Q86X52 802 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 IGDCC3Q8IVU1 814 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 ZNF713Q8N859 430 aaPredicted RBP10.28□□□□□ -0.76
COL13A1-207ENST00000478219 ICA1LQ8NDH6 482 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 DCUN1D1Q96GG9 259 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 TMEM121Q9BTD3 319 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 NYXQ9GZU5 481 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 XPNPEP1Q9NQW7 623 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 KCNK4Q9NYG8 393 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 SOX13Q9UN79 622 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 NAV1Q8NEY1 1877 aa10.28□□□□□ -0.76
COL13A1-207ENST00000478219 TMX2-CTNND1H3BSU7 103 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 NDC80O14777 642 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 STRNO43815 780 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 ZMPSTE24O75844 475 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 CRTAMO95727 393 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 PROCP04070 461 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 ALDH2P05091 517 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 CD1EP15812 388 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 SNAP25P60880 206 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 PFKPQ01813 784 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 TBC1D10BQ4KMP7 808 aaPredicted RBP10.27□□□□□ -0.76
COL13A1-207ENST00000478219 MAP3K21Q5TCX8 1036 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 TMEM53Q6P2H8 277 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 ZCCHC23Q6ZST2 131 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 C1orf186Q6ZWK4 172 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 ERLEC1Q96DZ1 483 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 ZNF512Q96ME7 567 aaPredicted RBP10.27□□□□□ -0.76
COL13A1-207ENST00000478219 MMP19Q99542 508 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 EIF2AK1Q9BQI3 630 aaKnown RBP10.27□□□□□ -0.76
COL13A1-207ENST00000478219 CBWD1Q9BRT8 395 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 ANKRD2Q9GZV1 360 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 TMOD2Q9NZR1 351 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 SAE1Q9UBE0 346 aaPredicted RBP10.27□□□□□ -0.76
COL13A1-207ENST00000478219 POMPQ9Y244 141 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 DTNAQ9Y4J8 743 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 PHLPP1O60346 1717 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 DOT1LQ8TEK3 1739 aa10.27□□□□□ -0.76
COL13A1-207ENST00000478219 RGL2O15211 777 aa10.27□□□□□ -0.77
COL13A1-207ENST00000478219 TPD52L2O43399 206 aaKnown RBP10.27□□□□□ -0.77
COL13A1-207ENST00000478219 ADAM23O75077 832 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms