RNA–Protein interactions for RNA: ENST00000478052.1

FAM208A-206, Transcript of family with sequence similarity 208 member A, human

TSL 3

Gene FAM208A, Length 299 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM208A-206	ENST00000478052	LRRC14B	A6NHZ5	514 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	SMIM22	K7EJ46	135 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	FZD9	O00144	591 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	IPO5	O00410	1097 aa	Known RBP	2.57	□□□□□ -2
FAM208A-206	ENST00000478052	PES1	O00541	588 aa	Known RBP	2.57	□□□□□ -2
FAM208A-206	ENST00000478052	PPP6C	O00743	305 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	NPHP1	O15259	732 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	PPM1D	O15297	605 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	XPOT	O43592	962 aa	Known RBP	2.57	□□□□□ -2
FAM208A-206	ENST00000478052	PRC1	O43663	620 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	KIF5C	O60282	957 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	MOSPD3	O75425	235 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	JTB	O76095	146 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	BMP15	O95972	392 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	CHEK2	O96017	543 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	S100B	P04271	92 aa	Predicted RBP	2.57	□□□□□ -2
FAM208A-206	ENST00000478052	GNAI3	P08754	354 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	CT47B1	P0C2W7	299 aa	Predicted RBP	2.57	□□□□□ -2
FAM208A-206	ENST00000478052	CCDC172	P0C7W6	258 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	NDUFB7	P17568	137 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	ITGAL	P20701	1170 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	CERS1	P27544	350 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	CD6	P30203	668 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	CYP2C19	P33261	490 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	TBX4	P57082	545 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	GNAI1	P63096	354 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	MAPRE1	Q15691	268 aa	Known RBP	2.57	□□□□□ -2
FAM208A-206	ENST00000478052	ABCB5	Q2M3G0	1257 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	RNF187	Q5TA31	235 aa	Predicted RBP	2.57	□□□□□ -2
FAM208A-206	ENST00000478052	PRAMEF17	Q5VTA0	474 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	EGFLAM	Q63HQ2	1017 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	PPP4R3A	Q6IN85	833 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	SLC18B1	Q6NT16	456 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	CTR9	Q6PD62	1173 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	SLC4A10	Q6U841	1118 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	SLC29A4	Q7RTT9	530 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	UBE2Q1	Q7Z7E8	422 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	TTC7B	Q86TV6	843 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	ZSCAN30	Q86W11	494 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	DDX42	Q86XP3	938 aa	Known RBP eCLIP	2.57	□□□□□ -2
FAM208A-206	ENST00000478052	HSCB	Q8IWL3	235 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	LMNTD2	Q8IXW0	634 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	FANCB	Q8NB91	859 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	VPS37A	Q8NEZ2	397 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	KLHDC4	Q8TBB5	520 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	RSPH1	Q8WYR4	309 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	CCDC47	Q96A33	483 aa	Known RBP	2.57	□□□□□ -2
FAM208A-206	ENST00000478052	RUNDC1	Q96C34	613 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	TEKT5	Q96M29	485 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	CNPPD1	Q9BV87	410 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	PNN	Q9H307	717 aa	Known RBP	2.57	□□□□□ -2
FAM208A-206	ENST00000478052	ZHX3	Q9H4I2	956 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	CXorf56	Q9H5V9	222 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	RETREG1	Q9H6L5	497 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	GPR35	Q9HC97	309 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	SLAMF7	Q9NQ25	335 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	MAN1C1	Q9NR34	630 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	RLIM	Q9NVW2	624 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	UTP6	Q9NYH9	597 aa	Known RBP	2.57	□□□□□ -2
FAM208A-206	ENST00000478052	CFAP97	Q9P2B7	532 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	TCEAL9	Q9UHQ7	104 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	ISY1	Q9ULR0	285 aa	Known RBP	2.57	□□□□□ -2
FAM208A-206	ENST00000478052	RAD54B	Q9Y620	910 aa		2.57	□□□□□ -2
FAM208A-206	ENST00000478052	CFAP20	Q9Y6A4	193 aa	Known RBP	2.57	□□□□□ -2
FAM208A-206	ENST00000478052	VGLL3	A8MV65	326 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	PRRT4	C9JH25	899 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052		H0YIZ8	118 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	HTATSF1	O43719	755 aa	Known RBP	2.56	□□□□□ -2
FAM208A-206	ENST00000478052	SOAT2	O75908	522 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	NXPH3	O95157	252 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	TOP3B	O95985	862 aa	Known RBP	2.56	□□□□□ -2
FAM208A-206	ENST00000478052	RPLP2	P05387	115 aa	Known RBP	2.56	□□□□□ -2
FAM208A-206	ENST00000478052	TPM3	P06753	285 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	CCDC175	P0C221	793 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	MYBL2	P10244	700 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	SFPQ	P23246	707 aa	Known RBP eCLIP	2.56	□□□□□ -2
FAM208A-206	ENST00000478052	SMARCA1	P28370	1054 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	PRDX5	P30044	214 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	CYP2C18	P33260	490 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	LIPA	P38571	399 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	ALDH9A1	P49189	494 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	TERF1	P54274	439 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	EIF5	P55010	431 aa	Known RBP	2.56	□□□□□ -2
FAM208A-206	ENST00000478052	NAP1L1	P55209	391 aa	Known RBP	2.56	□□□□□ -2
FAM208A-206	ENST00000478052	TCF15	Q12870	199 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	BOP1	Q14137	746 aa	Known RBP	2.56	□□□□□ -2
FAM208A-206	ENST00000478052	KCTD2	Q14681	263 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	PCBP2	Q15366	365 aa	Known RBP eCLIP	2.56	□□□□□ -2
FAM208A-206	ENST00000478052	UAP1L1	Q3KQV9	507 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	SYDE2	Q5VT97	1194 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	SLC9A4	Q6AI14	798 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	SLC2A7	Q6PXP3	512 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	MAVS	Q7Z434	540 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	PPP1R32	Q7Z5V6	425 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	NECAB2	Q7Z6G3	386 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	FAM90A1	Q86YD7	464 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	2.56	□□□□□ -2
FAM208A-206	ENST00000478052	SAMD3	Q8N6K7	520 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	ACRBP	Q8NEB7	543 aa		2.56	□□□□□ -2
FAM208A-206	ENST00000478052	ATRIP	Q8WXE1	791 aa		2.56	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms