RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 B3GALNT2Q8NCR0 500 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 SCAMP4Q969E2 229 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 PBKQ96KB5 322 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 PRAM1Q96QH2 718 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 HAPLN3Q96S86 360 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 SMOQ99835 787 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 SLC29A3Q9BZD2 475 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 SLC13A1Q9BZW2 595 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 MAN1C1Q9NR34 630 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 RLIMQ9NVW2 624 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 RNF7Q9UBF6 113 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 ASXL1Q8IXJ9 1541 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 TMEM2Q9UHN6 1383 aa5.52□□□□□ -1.53
LMBR1-216ENST00000477983 NKTRP30414 1462 aaKnown RBP5.51□□□□□ -1.53
LMBR1-216ENST00000477983 UBR1Q8IWV7 1749 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 TNKSO95271 1327 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 MANSC4A6NHS7 340 aaPredicted RBP5.51□□□□□ -1.53
LMBR1-216ENST00000477983 F2RL2O00254 374 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 ERBB2P04626 1255 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 MALP21145 153 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 DSC2Q02487 901 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 TFF2Q03403 129 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 SNAPC2Q13487 334 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 ODF1Q14990 250 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 KHDC1Q4VXA5 237 aaKnown RBP5.51□□□□□ -1.53
LMBR1-216ENST00000477983 EPHA10Q5JZY3 1008 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 SEMA6DQ8NFY4 1073 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 RFKQ969G6 155 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 ZNF778Q96MU6 729 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 VRK1Q99986 396 aaPredicted RBP5.51□□□□□ -1.53
LMBR1-216ENST00000477983 ALG8Q9BVK2 526 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 AMBRA1Q9C0C7 1298 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 SLC12A5Q9H2X9 1139 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 ETAA1Q9NY74 926 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 FLRT1Q9NZU1 646 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 NLRP1Q9C000 1473 aa5.51□□□□□ -1.53
LMBR1-216ENST00000477983 RIMS1Q86UR5 1692 aaKnown RBP5.5□□□□□ -1.53
LMBR1-216ENST00000477983 A0A0B4J269 797 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 PRSS29PA6NIE9 313 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 NT5C1B-RDH14C9J2C7 533 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 TRIAP1O43715 76 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 ZNF81P51508 661 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 SSBP2P81877 361 aaPredicted RBP5.5□□□□□ -1.53
LMBR1-216ENST00000477983 TCF15Q12870 199 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 TUBB3Q13509 450 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 CCDC93Q567U6 631 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 ZNF425Q6IV72 752 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 SLC4A10Q6U841 1118 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 FAM177A1Q8N128 213 aaPredicted RBP5.5□□□□□ -1.53
LMBR1-216ENST00000477983 BRINP2Q9C0B6 783 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 GPR35Q9HC97 309 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 PCDH12Q9NPG4 1184 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 ZNF70Q9UC06 446 aaPredicted RBP5.5□□□□□ -1.53
LMBR1-216ENST00000477983 ST3GAL5Q9UNP4 418 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.5□□□□□ -1.53
LMBR1-216ENST00000477983 COL4A3BPQ9Y5P4 624 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 EID1Q9Y6B2 187 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 METP08581 1390 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 PTPRMP28827 1452 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 MYOM1P52179 1685 aa5.5□□□□□ -1.53
LMBR1-216ENST00000477983 TULP4Q9NRJ4 1543 aa5.49□□□□□ -1.53
LMBR1-216ENST00000477983 NRXN3Q9Y4C0 1643 aa5.49□□□□□ -1.53
LMBR1-216ENST00000477983 POLRMTO00411 1230 aaKnown RBP5.49□□□□□ -1.53
LMBR1-216ENST00000477983 SOAT2O75908 522 aa5.49□□□□□ -1.53
LMBR1-216ENST00000477983 URI1O94763 535 aaPredicted RBP5.49□□□□□ -1.53
LMBR1-216ENST00000477983 ZRANB2O95218 330 aaKnown RBP eCLIP5.49□□□□□ -1.53
LMBR1-216ENST00000477983 FXR1P51114 621 aaKnown RBP eCLIP5.49□□□□□ -1.53
LMBR1-216ENST00000477983 HABP2Q14520 560 aaPredicted RBP5.49□□□□□ -1.53
LMBR1-216ENST00000477983 FAM153CQ494X1 144 aa5.49□□□□□ -1.53
LMBR1-216ENST00000477983 LCE1AQ5T7P2 110 aa5.49□□□□□ -1.53
LMBR1-216ENST00000477983 AMIGO2Q86SJ2 522 aa5.49□□□□□ -1.53
LMBR1-216ENST00000477983 RASAL3Q86YV0 1011 aa5.49□□□□□ -1.53
LMBR1-216ENST00000477983 PUS7Q96PZ0 661 aaKnown RBP5.49□□□□□ -1.53
LMBR1-216ENST00000477983 CDK19Q9BWU1 502 aa5.49□□□□□ -1.53
LMBR1-216ENST00000477983 BRD9Q9H8M2 597 aa5.49□□□□□ -1.53
LMBR1-216ENST00000477983 SERTAD4Q9NUC0 356 aa5.49□□□□□ -1.53
LMBR1-216ENST00000477983 LAS1LQ9Y4W2 734 aaKnown RBP5.49□□□□□ -1.53
LMBR1-216ENST00000477983 PLEKHH1Q9ULM0 1364 aa5.49□□□□□ -1.53
LMBR1-216ENST00000477983 SETD1AO15047 1707 aaKnown RBP5.48□□□□□ -1.53
LMBR1-216ENST00000477983 ABCC11Q96J66 1382 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 PLEKHG1Q9ULL1 1385 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 KRTAP29-1A8MX34 341 aaPredicted RBP5.48□□□□□ -1.53
LMBR1-216ENST00000477983 F5H697 171 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 TTLL1O95922 423 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 CHEK2O96017 543 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 ITGB6P18564 788 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 CCND1P24385 295 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 PPP2R1AP30153 589 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 NDUFV1P49821 464 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 EXOSC10Q01780 885 aaKnown RBP5.48□□□□□ -1.53
LMBR1-216ENST00000477983 WDR63Q8IWG1 891 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 MIER2Q8N344 545 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 FAM109AQ8N4B1 249 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 DDB2Q92466 427 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 FRAT1Q92837 279 aaPredicted RBP5.48□□□□□ -1.53
LMBR1-216ENST00000477983 ASPSCR1Q9BZE9 553 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 CHMP4BQ9H444 224 aaKnown RBP5.48□□□□□ -1.53
LMBR1-216ENST00000477983 GNL3LQ9NVN8 582 aaKnown RBP5.48□□□□□ -1.53
LMBR1-216ENST00000477983 EHD3Q9NZN3 535 aa5.48□□□□□ -1.53
LMBR1-216ENST00000477983 CFAP97Q9P2B7 532 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms