RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 RPL34P49207 117 aaKnown RBP8.36□□□□□ -1.07
VMA21-203ENST00000477649 CARSP49589 748 aaKnown RBP8.36□□□□□ -1.07
VMA21-203ENST00000477649 APLP1P51693 650 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 ZNF143P52747 638 aaPredicted RBP8.36□□□□□ -1.07
VMA21-203ENST00000477649 ZNF200P98182 395 aaPredicted RBP8.36□□□□□ -1.07
VMA21-203ENST00000477649 BST2Q10589 180 aaKnown RBP8.36□□□□□ -1.07
VMA21-203ENST00000477649 NFX1Q12986 1120 aaKnown RBP8.36□□□□□ -1.07
VMA21-203ENST00000477649 CALCOCO2Q13137 446 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 ITGA7Q13683 1181 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 PTGISQ16647 500 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 GLIPR1L2Q4G1C9 344 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 PKDCCQ504Y2 493 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 CCDC137Q6PK04 289 aaKnown RBP8.36□□□□□ -1.07
VMA21-203ENST00000477649 LRIG3Q6UXM1 1119 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 JAMLQ86YT9 394 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 CCDC105Q8IYK2 499 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 CCDC89Q8N998 374 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 OR6B3Q8NGW1 331 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 IFT81Q8WYA0 676 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 ELMO3Q96BJ8 720 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 BTBD6Q96KE9 485 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 PPP1R10Q96QC0 940 aaKnown RBP8.36□□□□□ -1.07
VMA21-203ENST00000477649 TWNKQ96RR1 684 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 TBCBQ99426 244 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 SLC4A5Q9BY07 1137 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 ARHGAP39Q9C0H5 1083 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 ERVK-5Q9HDB9 667 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 WHRNQ9P202 907 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 TUBGCP4Q9UGJ1 667 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 TSPAN16Q9UKR8 245 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 DSEQ9UL01 958 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 NFU1Q9UMS0 254 aa8.36□□□□□ -1.07
VMA21-203ENST00000477649 DRG1Q9Y295 367 aaKnown RBP8.36□□□□□ -1.07
VMA21-203ENST00000477649 A0A0U1RQF3 1178 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 SMAPO00193 183 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 GABRDO14764 452 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 INPPL1O15357 1258 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 TTI1O43156 1089 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 ZMYND10O75800 440 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 EOMESO95936 686 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 CALCAP01258 141 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 CHRNA1P02708 482 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 GPD1P21695 349 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 AKAP5P24588 427 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 THPOP40225 353 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 PTGIRP43119 386 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 SSR1P43307 286 aaKnown RBP8.35□□□□□ -1.07
VMA21-203ENST00000477649 MARCKSL1P49006 195 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 ACLYP53396 1101 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 EIF3BP55884 814 aaKnown RBP8.35□□□□□ -1.07
VMA21-203ENST00000477649 LILRA4P59901 499 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 KLF1Q13351 362 aaPredicted RBP8.35□□□□□ -1.07
VMA21-203ENST00000477649 SLMAPQ14BN4 828 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 SIX1Q15475 284 aaPredicted RBP8.35□□□□□ -1.07
VMA21-203ENST00000477649 PTPROQ16827 1216 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 SOWAHAQ2M3V2 549 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 GOLGA7BQ2TAP0 167 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 BOLA3Q53S33 107 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 TFDP3Q5H9I0 405 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 CCDC50Q8IVM0 306 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 MAP7D3Q8IWC1 876 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 ADGRF2Q8IZF7 708 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 SLC35F5Q8WV83 523 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 TEKT4Q8WW24 435 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 C18orf25Q96B23 403 aaPredicted RBP8.35□□□□□ -1.07
VMA21-203ENST00000477649 CPXM1Q96SM3 734 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 ZIC5Q96T25 663 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 FMO2Q99518 471 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 HNRNPABQ99729 332 aaKnown RBP8.35□□□□□ -1.07
VMA21-203ENST00000477649 MRPL45Q9BRJ2 306 aaKnown RBP8.35□□□□□ -1.07
VMA21-203ENST00000477649 APOL6Q9BWW8 343 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 FTHL17Q9BXU8 183 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 HMX1Q9NP08 348 aaPredicted RBP8.35□□□□□ -1.07
VMA21-203ENST00000477649 RNF186Q9NXI6 227 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 CHORDC1Q9UHD1 332 aaPredicted RBP8.35□□□□□ -1.07
VMA21-203ENST00000477649 HES2Q9Y543 173 aa8.35□□□□□ -1.07
VMA21-203ENST00000477649 GOLGA6L10A6NI86 522 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 PTGESO14684 152 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 XPO1O14980 1071 aaKnown RBP8.34□□□□□ -1.07
VMA21-203ENST00000477649 FKTNO75072 461 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 FBXO21O94952 628 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 KRT1P04264 644 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 MYBL2P10244 700 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 PCSK1P29120 753 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 OAS2P29728 719 aaKnown RBP8.34□□□□□ -1.07
VMA21-203ENST00000477649 CCND3P30281 292 aaPredicted RBP8.34□□□□□ -1.07
VMA21-203ENST00000477649 RFC1P35251 1148 aaPredicted RBP8.34□□□□□ -1.07
VMA21-203ENST00000477649 PTPN9P43378 593 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 GUCY2FP51841 1108 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 TAS2R40P59535 323 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 RPL7AP62424 266 aaKnown RBP8.34□□□□□ -1.07
VMA21-203ENST00000477649 CBX1P83916 185 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 SLC6A3Q01959 620 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 PLCB3Q01970 1234 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 GRIK3Q13003 919 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 PTK6Q13882 451 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 TFDP2Q14188 446 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 DSC3Q14574 896 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 PDK2Q15119 407 aa8.34□□□□□ -1.07
VMA21-203ENST00000477649 PPP1R7Q15435 360 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms