RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 FARP2O94887 1054 aaPredicted RBP18.96■□□□□ 0.63
CCM2-209ENST00000477605 TROVE2P10155 538 aaKnown RBP eCLIP18.96■□□□□ 0.63
CCM2-209ENST00000477605 TGFB3P10600 412 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 RFC1P35251 1148 aaPredicted RBP18.96■□□□□ 0.63
CCM2-209ENST00000477605 RPL22P35268 128 aaKnown RBP18.96■□□□□ 0.63
CCM2-209ENST00000477605 ASPAP45381 313 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 CLNS1AP54105 237 aaKnown RBP18.96■□□□□ 0.63
CCM2-209ENST00000477605 SEPT7Q16181 437 aaKnown RBP18.96■□□□□ 0.63
CCM2-209ENST00000477605 C3orf62Q6ZUJ4 267 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 PDIK1LQ8N165 341 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 CFAP61Q8NHU2 1237 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 XYLT2Q9H1B5 865 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 SLCO1B3Q9NPD5 702 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 KIAA1217Q5T5P2 1943 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.96■□□□□ 0.63
CCM2-209ENST00000477605 ABLIM1O14639 778 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 UBA1P22314 1058 aaKnown RBP18.96■□□□□ 0.63
CCM2-209ENST00000477605 MAPK6Q16659 721 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 PTPN20Q4JDL3 420 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 HP1BP3Q5SSJ5 553 aaPredicted RBP18.96■□□□□ 0.63
CCM2-209ENST00000477605 DENND1BQ6P3S1 775 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 ZBTB33Q86T24 672 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 CMASQ8NFW8 434 aaPredicted RBP18.96■□□□□ 0.63
CCM2-209ENST00000477605 SEPT1Q8WYJ6 367 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 ANKRD36BP1Q96IX9 119 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 PAFAH2Q99487 392 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 APOC4-APOC2K7ER74 178 aa18.95■□□□□ 0.62
CCM2-209ENST00000477605 SPAG6O75602 509 aa18.95■□□□□ 0.62
CCM2-209ENST00000477605 APOC2P02655 101 aa18.95■□□□□ 0.62
CCM2-209ENST00000477605 PRKCBP05771 671 aa18.95■□□□□ 0.62
CCM2-209ENST00000477605 HOXC6P09630 235 aa18.95■□□□□ 0.62
CCM2-209ENST00000477605 STIP1P31948 543 aaKnown RBP18.95■□□□□ 0.62
CCM2-209ENST00000477605 TFDP1Q14186 410 aa18.95■□□□□ 0.62
CCM2-209ENST00000477605 CYP4A22Q5TCH4 519 aa18.95■□□□□ 0.62
CCM2-209ENST00000477605 OTOAQ7RTW8 1153 aa18.95■□□□□ 0.62
CCM2-209ENST00000477605 ANKMY2Q8IV38 441 aa18.95■□□□□ 0.62
CCM2-209ENST00000477605 PALM2Q8IXS6 379 aa18.95■□□□□ 0.62
CCM2-209ENST00000477605 BANPQ8N9N5 519 aa18.95■□□□□ 0.62
CCM2-209ENST00000477605 MZB1Q8WU39 189 aa18.95■□□□□ 0.62
CCM2-209ENST00000477605 SPOCK2Q92563 424 aa18.95■□□□□ 0.62
CCM2-209ENST00000477605 UTP4Q969X6 686 aaKnown RBP18.95■□□□□ 0.62
CCM2-209ENST00000477605 PROZP22891 400 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 EDNRBP24530 442 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 PSMC1P62191 440 aaKnown RBP18.94■□□□□ 0.62
CCM2-209ENST00000477605 ZNF394Q53GI3 561 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 WASHC2DQ5SRD0 308 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 FNBP1LQ5T0N5 605 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 SCARA3Q6AZY7 606 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 TSHZ1Q6ZSZ6 1077 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 RHPN2Q8IUC4 686 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 MICALL2Q8IY33 904 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 ARFGAP1Q8N6T3 406 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 ACSF2Q96CM8 615 aaPredicted RBP18.94■□□□□ 0.62
CCM2-209ENST00000477605 CYTH2Q99418 400 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 TLE6Q9H808 572 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 ZWILCHQ9H900 591 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 LNPEPQ9UIQ6 1025 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 A8MUI8 341 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 IL18RAPO95256 599 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 TFAMQ00059 246 aaKnown RBP18.94■□□□□ 0.62
CCM2-209ENST00000477605 SH3D19Q5HYK7 790 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 NOL9Q5SY16 702 aaKnown RBP18.94■□□□□ 0.62
CCM2-209ENST00000477605 ANKRD22Q5VYY1 191 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 MPZL3Q6UWV2 235 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 CAPN12Q6ZSI9 719 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 FBXO36Q8NEA4 188 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 DCAKDQ8WVC6 231 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 MIEF2Q96C03 454 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 BCO2Q9BYV7 579 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 FRMD8Q9BZ67 464 aaPredicted RBP18.94■□□□□ 0.62
CCM2-209ENST00000477605 RSAD1Q9HA92 442 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 DONSONQ9NYP3 566 aa18.94■□□□□ 0.62
CCM2-209ENST00000477605 IGKV6-21A0A0C4DH24 114 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 IQANK1A0A1B0GTG1 560 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 TTLL13PA6NNM8 815 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 GOLGA8SH3BPF8 625 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 RPSAP08865 295 aaKnown RBP18.93■□□□□ 0.62
CCM2-209ENST00000477605 T-ENOLP0DO92 83 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 IBSPP21815 317 aaPredicted RBP18.93■□□□□ 0.62
CCM2-209ENST00000477605 IL1R2P27930 398 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 SSTR1P30872 391 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 LAMTOR4Q0VGL1 99 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 METTL7BQ6UX53 244 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 KCTD6Q8NC69 237 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 SLC7A6OSQ96CW6 309 aaPredicted RBP18.93■□□□□ 0.62
CCM2-209ENST00000477605 PTPRHQ9HD43 1115 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 GOLGA8MH3BSY2 632 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 MCF2LO15068 1137 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 DIAPH2O60879 1101 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 FAM155BO75949 473 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 RNF8O76064 485 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 TGDSO95455 350 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 IL1BP01584 269 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 PTPN4P29074 926 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 PCK1P35558 622 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 GABRB2P47870 512 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 GDF10P55107 478 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 EIF3EP60228 445 aaKnown RBP18.93■□□□□ 0.62
CCM2-209ENST00000477605 MSS51Q4VC12 460 aa18.93■□□□□ 0.62
CCM2-209ENST00000477605 NLRP9Q7RTR0 991 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms