RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 CYP4F11Q9HBI6 524 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 ABCB6Q9NP58 842 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 ACP6Q9NPH0 428 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 MYO6Q9UM54 1294 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 YIPF1Q9Y548 306 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 DENND4CQ5VZ89 1909 aa16.26■□□□□ 0.19
SEC13-215ENST00000477547 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.25■□□□□ 0.19
SEC13-215ENST00000477547 O00370 1275 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 GLP2RO95838 553 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 C8AP07357 584 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 VDRP11473 427 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 CDC25BP30305 580 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 RBM10P98175 930 aaKnown RBP16.25■□□□□ 0.19
SEC13-215ENST00000477547 ARID5AQ03989 594 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 PTK2Q05397 1052 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 GSE1Q14687 1217 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 MGAT5BQ3V5L5 792 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 CFAP221Q4G0U5 840 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 PPP1R26Q5T8A7 1209 aaPredicted RBP16.25■□□□□ 0.19
SEC13-215ENST00000477547 ARHGAP17Q68EM7 881 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 LILRA6Q6PI73 481 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 SLC47A2Q86VL8 602 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 FMNL3Q8IVF7 1028 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 EFHBQ8N7U6 833 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 ZNF397Q8NF99 534 aaPredicted RBP16.25■□□□□ 0.19
SEC13-215ENST00000477547 SLC7A14Q8TBB6 771 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 TFAP2BQ92481 460 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 CASP10Q92851 521 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 CYFIP2Q96F07 1278 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 SMARCD1Q96GM5 515 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 CRISPLD1Q9H336 500 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 INSL5Q9Y5Q6 135 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 DOCK6Q96HP0 2047 aa16.25■□□□□ 0.19
SEC13-215ENST00000477547 LINC01565O15544 149 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 MFAP3LO75121 409 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 SEC24AO95486 1093 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 C1RP00736 705 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 FAM200BP0CF97 657 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 BDNFP23560 247 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 CASP14P31944 242 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 CLCN1P35523 988 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 BPIFB4P59827 614 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 ZBED6P86452 979 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 DUSP4Q13115 394 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 STILQ15468 1287 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 ASIC2Q16515 512 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 LEXMQ3ZCV2 418 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 E4F1Q66K89 784 aaPredicted RBP16.24■□□□□ 0.19
SEC13-215ENST00000477547 CCDC149Q6ZUS6 474 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 TCEAL8Q8IYN2 117 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 EPS8L1Q8TE68 723 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 HNRNPABQ99729 332 aaKnown RBP16.24■□□□□ 0.19
SEC13-215ENST00000477547 DZANK1Q9NVP4 752 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 DPP7Q9UHL4 492 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 TSPAN16Q9UKR8 245 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 KIAA1257Q9ULG3 409 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 MAFFQ9ULX9 164 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 CAPN11Q9UMQ6 739 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.24■□□□□ 0.19
SEC13-215ENST00000477547 SLC27A5Q9Y2P5 690 aa16.24■□□□□ 0.19
SEC13-215ENST00000477547 LUC7L2Q9Y383 392 aaKnown RBP16.24■□□□□ 0.19
SEC13-215ENST00000477547 M0QYV0 167 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 MED7O43513 233 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 AP1G2O75843 785 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 SOAT2O75908 522 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 HAPLN1P10915 354 aaPredicted RBP16.23■□□□□ 0.19
SEC13-215ENST00000477547 ALADP13716 330 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 CYP11B1P15538 503 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 FERP16591 822 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 CYP2F1P24903 491 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 MAGEA11P43364 429 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 KCNC3Q14003 757 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 SFMBT2Q5VUG0 894 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 PTCRAQ6ISU1 281 aaPredicted RBP16.23■□□□□ 0.19
SEC13-215ENST00000477547 VSTM1Q6UX27 236 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 PAQR9Q6ZVX9 377 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.23■□□□□ 0.19
SEC13-215ENST00000477547 SCN4BQ8IWT1 228 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 DRC7Q8IY82 874 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 ZSWIM1Q9BR11 485 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 NUCKS1Q9H1E3 243 aaKnown RBP16.23■□□□□ 0.19
SEC13-215ENST00000477547 PLEKHA4Q9H4M7 779 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 SFXN1Q9H9B4 322 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 DMAP1Q9NPF5 467 aaPredicted RBP16.23■□□□□ 0.19
SEC13-215ENST00000477547 CLDND1Q9NY35 253 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 HSFX1Q9UBD0 423 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 HESX1Q9UBX0 185 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 ANAPC1Q9H1A4 1944 aa16.23■□□□□ 0.19
SEC13-215ENST00000477547 TBX10O75333 385 aa16.22■□□□□ 0.19
SEC13-215ENST00000477547 ZMYND10O75800 440 aa16.22■□□□□ 0.19
SEC13-215ENST00000477547 LRG1P02750 347 aa16.22■□□□□ 0.19
SEC13-215ENST00000477547 CCDC172P0C7W6 258 aa16.22■□□□□ 0.19
SEC13-215ENST00000477547 NPR3P17342 541 aa16.22■□□□□ 0.19
SEC13-215ENST00000477547 ATF6P18850 670 aa16.22■□□□□ 0.19
SEC13-215ENST00000477547 KRT9P35527 623 aa16.22■□□□□ 0.19
SEC13-215ENST00000477547 GPR15P49685 360 aa16.22■□□□□ 0.19
SEC13-215ENST00000477547 CACNA2D1P54289 1103 aa16.22■□□□□ 0.19
SEC13-215ENST00000477547 BCAT1P54687 386 aa16.22■□□□□ 0.19
SEC13-215ENST00000477547 TBX2Q13207 712 aaPredicted RBP16.22■□□□□ 0.19
SEC13-215ENST00000477547 PLD1Q13393 1074 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms