RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 MAPRE1Q15691 268 aaKnown RBP12.16□□□□□ -0.46
HDLBP-236ENST00000477477 CSRP2Q16527 193 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 FAM26FQ5R3K3 315 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 NAIF1Q69YI7 327 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-236ENST00000477477 VSTM1Q6UX27 236 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 PRR23CQ6ZRP0 262 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 CPA6Q8N4T0 437 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 FAM160A2Q8N612 972 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-236ENST00000477477 ARL14EPQ8N8R7 260 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-236ENST00000477477 FSIP1Q8NA03 581 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 IQUBQ8NA54 791 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 ZNF507Q8TCN5 953 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 NETO1Q8TDF5 533 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 OSCP1Q8WVF1 389 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 SPATA17Q96L03 361 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 ZNF396Q96N95 335 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-236ENST00000477477 SLC22A12Q96S37 553 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 CYP2S1Q96SQ9 504 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 P2RY13Q9BPV8 354 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 ECT2Q9H8V3 914 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 FBRSL1Q9HCM7 1045 aaKnown RBP12.16□□□□□ -0.46
HDLBP-236ENST00000477477 CRTAC1Q9NQ79 661 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 AGPAT3Q9NRZ7 376 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 DUS2Q9NX74 493 aaKnown RBP12.16□□□□□ -0.46
HDLBP-236ENST00000477477 GCNT4Q9P109 453 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 MAGEC2Q9UBF1 373 aaPredicted RBP12.16□□□□□ -0.46
HDLBP-236ENST00000477477 WNT6Q9Y6F9 365 aa12.16□□□□□ -0.46
HDLBP-236ENST00000477477 UBE4BO95155 1302 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 DCDC2BA2VCK2 349 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 C2orf78A6NCI8 922 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 SLC30A4O14863 429 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 TGFB1I1O43294 461 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 CUTAO60888 179 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 TCF3P15923 654 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 BDNFP23560 247 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 IFNAR2P48551 515 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 GALK1P51570 392 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 KCNB1Q14721 858 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 PSMD6Q15008 389 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 SNRNP35Q16560 246 aaKnown RBP12.15□□□□□ -0.46
HDLBP-236ENST00000477477 FBXO43Q4G163 708 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 SHC4Q6S5L8 630 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 TRAPPC11Q7Z392 1133 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 SH3RF2Q8TEC5 729 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 GAB3Q8WWW8 586 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 ATP2A3Q93084 1043 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 EXOC4Q96A65 974 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 CEP295NLQ96MC4 621 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 MMS19Q96T76 1030 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 CGRRF1Q99675 332 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 C7orf25Q9BPX7 421 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 BACH2Q9BYV9 841 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 MAGEF1Q9HAY2 307 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 TFIP11Q9UBB9 837 aaKnown RBP12.15□□□□□ -0.46
HDLBP-236ENST00000477477 ARHGAP26Q9UNA1 814 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 SLC8A2Q9UPR5 921 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 SPTBN2O15020 2390 aa12.15□□□□□ -0.46
HDLBP-236ENST00000477477 OBSL1O75147 1896 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 DENND4CQ5VZ89 1909 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.14□□□□□ -0.47
HDLBP-236ENST00000477477 TRIM66O15016 1216 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 FOXD2O60548 495 aaPredicted RBP12.14□□□□□ -0.47
HDLBP-236ENST00000477477 TACC1O75410 805 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 RPP40O75818 363 aaKnown RBP12.14□□□□□ -0.47
HDLBP-236ENST00000477477 CST3P01034 146 aaPredicted RBP12.14□□□□□ -0.47
HDLBP-236ENST00000477477 PDGFRBP09619 1106 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 DLATP10515 647 aaKnown RBP12.14□□□□□ -0.47
HDLBP-236ENST00000477477 PFKLP17858 780 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 HDCP19113 662 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 GRIK1P39086 918 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 PXNP49023 591 aaPredicted RBP12.14□□□□□ -0.47
HDLBP-236ENST00000477477 PDE6CP51160 858 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 USP46P62068 366 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 SNRPFP62306 86 aaKnown RBP12.14□□□□□ -0.47
HDLBP-236ENST00000477477 CYP27A1Q02318 531 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 CYP24A1Q07973 514 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 EHHADHQ08426 723 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 EML3Q32P44 896 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 DENND5BQ6ZUT9 1274 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 UNC13DQ70J99 1090 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 NELFCDQ8IXH7 590 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 CAMKK1Q8N5S9 505 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 RDH13Q8NBN7 331 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 TTC16Q8NEE8 873 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 SCFD1Q8WVM8 642 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 EZH1Q92800 747 aaPredicted RBP12.14□□□□□ -0.47
HDLBP-236ENST00000477477 CD101Q93033 1021 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 PCED1BQ96HM7 432 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 FNBP1Q96RU3 617 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 MRPL45Q9BRJ2 306 aaKnown RBP12.14□□□□□ -0.47
HDLBP-236ENST00000477477 NME7Q9Y5B8 376 aa12.14□□□□□ -0.47
HDLBP-236ENST00000477477 F8VP50 259 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 CLIC2O15247 247 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 GDF9O60383 454 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 AKAP3O75969 853 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 EPN2O95208 641 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 FAM163BP0C2L3 166 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 TNNI1P19237 187 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 ANXA13P27216 316 aa12.13□□□□□ -0.47
HDLBP-236ENST00000477477 CYP2J2P51589 502 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms