RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 AUHQ13825 339 aaKnown RBP11.52□□□□□ -0.57
COL27A1-204ENST00000477421 QPCTQ16769 361 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 ATG16L1Q676U5 607 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 C12orf29Q8N999 325 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 TNIP3Q96KP6 325 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 FAM161BQ96MY7 647 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 NUDCD1Q96RS6 583 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 BFARQ9NZS9 450 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 ABT1Q9ULW3 272 aaKnown RBP11.52□□□□□ -0.57
COL27A1-204ENST00000477421 PHTF1Q9UMS5 762 aa11.52□□□□□ -0.57
COL27A1-204ENST00000477421 E5RJQ4 531 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 O00370 1275 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 TNPO2O14787 897 aaKnown RBP11.51□□□□□ -0.57
COL27A1-204ENST00000477421 HSPA4LO95757 839 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 TGFB3P10600 412 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 ALDH18A1P54886 795 aaKnown RBP11.51□□□□□ -0.57
COL27A1-204ENST00000477421 VCPP55072 806 aaKnown RBP11.51□□□□□ -0.57
COL27A1-204ENST00000477421 GEMIN4P57678 1058 aaKnown RBP11.51□□□□□ -0.57
COL27A1-204ENST00000477421 POU5F1BQ06416 359 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 RPS6KA2Q15349 733 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 TAF1CQ15572 869 aaPredicted RBP11.51□□□□□ -0.57
COL27A1-204ENST00000477421 ABHD15Q6UXT9 468 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 BZW1Q7L1Q6 419 aaKnown RBP11.51□□□□□ -0.57
COL27A1-204ENST00000477421 SLC7A14Q8TBB6 771 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 CCT6BQ92526 530 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 KIF9Q9HAQ2 790 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 HAO1Q9UJM8 370 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 DOT1LQ8TEK3 1739 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 PPFIA2O75334 1257 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 ENO1P06733 434 aaKnown RBP11.51□□□□□ -0.57
COL27A1-204ENST00000477421 CHRNB2P17787 502 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 YY1P25490 414 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 GCKP35557 465 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 MMRN1Q13201 1228 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 NPNTQ6UXI9 565 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 ZPBP2Q6X784 338 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 C4orf50Q6ZRC1 276 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 CDKL3Q8IVW4 592 aaPredicted RBP11.51□□□□□ -0.57
COL27A1-204ENST00000477421 TRIM42Q8IWZ5 723 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 KIRREL3Q8IZU9 778 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 MREGQ8N565 214 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 PAFAH2Q99487 392 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 ADARB2Q9NS39 739 aaKnown RBP11.51□□□□□ -0.57
COL27A1-204ENST00000477421 SENP1Q9P0U3 644 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 SMG5Q9UPR3 1016 aaKnown RBP11.51□□□□□ -0.57
COL27A1-204ENST00000477421 TELO2Q9Y4R8 837 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 MYO5AQ9Y4I1 1855 aaKnown RBP11.51□□□□□ -0.57
COL27A1-204ENST00000477421 ADGRA3Q8IWK6 1321 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 DFFAO00273 331 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 CFHP08603 1231 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 ACO1P21399 889 aaKnown RBP11.51□□□□□ -0.57
COL27A1-204ENST00000477421 MMP14P50281 582 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 THOC5Q13769 683 aaKnown RBP11.51□□□□□ -0.57
COL27A1-204ENST00000477421 GNASQ5JWF2 1037 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 ARID3BQ8IVW6 561 aaPredicted RBP11.51□□□□□ -0.57
COL27A1-204ENST00000477421 ADAM32Q8TC27 787 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 HASPINQ8TF76 798 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 AVENQ9NQS1 362 aaPredicted RBP11.51□□□□□ -0.57
COL27A1-204ENST00000477421 PCYOX1Q9UHG3 505 aa11.51□□□□□ -0.57
COL27A1-204ENST00000477421 ZNF536O15090 1300 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 SRCAPQ6ZRS2 3230 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 PABPN1LA6NDY0 278 aaKnown RBP11.5□□□□□ -0.57
COL27A1-204ENST00000477421 CREB1P16220 341 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 DGKDQ16760 1214 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 DENND5BQ6ZUT9 1274 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 LRRC6Q86X45 466 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 MFSD14AQ96MC6 490 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 ABCF3Q9NUQ8 709 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.5□□□□□ -0.57
COL27A1-204ENST00000477421 CPA4Q9UI42 421 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 USH1CQ9Y6N9 552 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 LOC100653049A0A140TA62 436 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 M0QYT0 321 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 KRT34O76011 436 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 TNFRSF8P28908 595 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 ELK3P41970 407 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 OAZ1P54368 228 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 RAD23BP54727 409 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 DEUP1Q05D60 604 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 MMEL1Q495T6 779 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 IL31Q6EBC2 164 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 POTEAQ6S8J7 498 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 ZNF560Q96MR9 790 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 ZNF214Q9UL59 606 aaPredicted RBP11.5□□□□□ -0.57
COL27A1-204ENST00000477421 PHLPP1O60346 1717 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 LYPLA2O95372 231 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 VDRP11473 427 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 NCAM1P13591 858 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 ADORA2AP29274 412 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 TPI1P60174 286 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 BOLA3Q53S33 107 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 PRAMEF19Q5SWL8 479 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 DCAF12L1Q5VU92 463 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 RASGEF1CQ8N431 466 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 JOSD2Q8TAC2 188 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 PGM2Q96G03 612 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 CNPY3Q9BT09 278 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 PAK5Q9P286 719 aa11.5□□□□□ -0.57
COL27A1-204ENST00000477421 NOCTQ9UK39 431 aaKnown RBP11.5□□□□□ -0.57
COL27A1-204ENST00000477421 ZMYM2Q9UBW7 1377 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms