RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 CETN1Q12798 172 aa14.29□□□□□ -0.12
ACTN4-205ENST00000477174 CT47A1Q5JQC4 288 aaPredicted RBP14.29□□□□□ -0.12
ACTN4-205ENST00000477174 SDHAF4Q5VUM1 108 aa14.29□□□□□ -0.12
ACTN4-205ENST00000477174 TMEM150AQ86TG1 271 aa14.29□□□□□ -0.12
ACTN4-205ENST00000477174 ACOT1Q86TX2 421 aa14.29□□□□□ -0.12
ACTN4-205ENST00000477174 FBXL6Q8N531 539 aa14.29□□□□□ -0.12
ACTN4-205ENST00000477174 ST13P5Q8NFI4 369 aaPredicted RBP14.29□□□□□ -0.12
ACTN4-205ENST00000477174 NT5C1AQ9BXI3 368 aa14.29□□□□□ -0.12
ACTN4-205ENST00000477174 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.29□□□□□ -0.126e-7■□□□□ 8.8
ACTN4-205ENST00000477174 FBXL21Q9UKT6 434 aa14.29□□□□□ -0.12
ACTN4-205ENST00000477174 MAGED2Q9UNF1 606 aaPredicted RBP14.29□□□□□ -0.12
ACTN4-205ENST00000477174 ATP8B3O60423 1300 aa14.29□□□□□ -0.12
ACTN4-205ENST00000477174 F8VP50 259 aa14.28□□□□□ -0.12
ACTN4-205ENST00000477174 LRRN2O75325 713 aa14.28□□□□□ -0.12
ACTN4-205ENST00000477174 CILPO75339 1184 aa14.28□□□□□ -0.12
ACTN4-205ENST00000477174 CCDC192P0DO97 292 aa14.28□□□□□ -0.12
ACTN4-205ENST00000477174 FCARP24071 287 aa14.28□□□□□ -0.12
ACTN4-205ENST00000477174 DDX6P26196 483 aaKnown RBP eCLIP14.28□□□□□ -0.122e-8■□□□□ 8.2
ACTN4-205ENST00000477174 ERCC5P28715 1186 aaPredicted RBP14.28□□□□□ -0.12
ACTN4-205ENST00000477174 PPP3CCP48454 512 aa14.28□□□□□ -0.12
ACTN4-205ENST00000477174 GPR158Q5T848 1215 aa14.28□□□□□ -0.12
ACTN4-205ENST00000477174 DENND5BQ6ZUT9 1274 aa14.28□□□□□ -0.12
ACTN4-205ENST00000477174 ARID3BQ8IVW6 561 aaPredicted RBP14.28□□□□□ -0.12
ACTN4-205ENST00000477174 MFSD6LQ8IWD5 586 aa14.28□□□□□ -0.12
ACTN4-205ENST00000477174 TRIM59Q8IWR1 403 aa14.28□□□□□ -0.12
ACTN4-205ENST00000477174 SUGP1Q8IWZ8 645 aaKnown RBP14.28□□□□□ -0.12
ACTN4-205ENST00000477174 GPT2Q8TD30 523 aa14.28□□□□□ -0.12
ACTN4-205ENST00000477174 DEPDC1BQ8WUY9 529 aa14.28□□□□□ -0.12
ACTN4-205ENST00000477174 MRPS31Q92665 395 aaKnown RBP14.28□□□□□ -0.12
ACTN4-205ENST00000477174 SLC46A2Q9BY10 475 aa14.28□□□□□ -0.12
ACTN4-205ENST00000477174 PLA2G2FQ9BZM2 168 aa14.28□□□□□ -0.12
ACTN4-205ENST00000477174 ZNF518BQ9C0D4 1074 aa14.28□□□□□ -0.12
ACTN4-205ENST00000477174 DACH1Q9UI36 760 aa14.28□□□□□ -0.12
ACTN4-205ENST00000477174 CLDN5O00501 218 aa14.27□□□□□ -0.13
ACTN4-205ENST00000477174 CFHP08603 1231 aa14.27□□□□□ -0.13
ACTN4-205ENST00000477174 PSMC3P17980 439 aa14.27□□□□□ -0.13
ACTN4-205ENST00000477174 VIPR2P41587 438 aa14.27□□□□□ -0.13
ACTN4-205ENST00000477174 STXBP5Q5T5C0 1151 aa14.27□□□□□ -0.13
ACTN4-205ENST00000477174 PAQR9Q6ZVX9 377 aa14.27□□□□□ -0.13
ACTN4-205ENST00000477174 MON1AQ86VX9 555 aa14.27□□□□□ -0.13
ACTN4-205ENST00000477174 FUKQ8N0W3 1084 aa14.27□□□□□ -0.13
ACTN4-205ENST00000477174 SIX5Q8N196 739 aa14.27□□□□□ -0.13
ACTN4-205ENST00000477174 WHAMMQ8TF30 809 aa14.27□□□□□ -0.13
ACTN4-205ENST00000477174 TATDN2Q93075 761 aa14.27□□□□□ -0.13
ACTN4-205ENST00000477174 SMARCD1Q96GM5 515 aa14.27□□□□□ -0.13
ACTN4-205ENST00000477174 MED15Q96RN5 788 aa14.27□□□□□ -0.13
ACTN4-205ENST00000477174 HNRNPABQ99729 332 aaKnown RBP14.27□□□□□ -0.13
ACTN4-205ENST00000477174 MED10Q9BTT4 135 aa14.27□□□□□ -0.13
ACTN4-205ENST00000477174 TRMT61BQ9BVS5 477 aaKnown RBP14.27□□□□□ -0.13
ACTN4-205ENST00000477174 TTLL2Q9BWV7 592 aa14.27□□□□□ -0.13
ACTN4-205ENST00000477174 MFSD1Q9H3U5 465 aa14.27□□□□□ -0.13
ACTN4-205ENST00000477174 OBP2AQ9NY56 170 aa14.27□□□□□ -0.13
ACTN4-205ENST00000477174 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.27□□□□□ -0.13
ACTN4-205ENST00000477174 ZDBF2Q9HCK1 2354 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 DPYSL4O14531 572 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 MBD3O95983 291 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 CD58P19256 250 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 COL9A1P20849 921 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 TBXAS1P24557 533 aaPredicted RBP14.26□□□□□ -0.13
ACTN4-205ENST00000477174 CLCN5P51795 746 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 CYP4F8P98187 520 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 KCNH2Q12809 1159 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 FAM35AQ86V20 835 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 CMTM8Q8IZV2 173 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 NUP93Q8N1F7 819 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 C12orf29Q8N999 325 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 SLC2A14Q8TDB8 520 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 IRF7Q92985 503 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 SHDQ96IW2 340 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 DMAP1Q9NPF5 467 aaPredicted RBP14.26□□□□□ -0.13
ACTN4-205ENST00000477174 TRPV5Q9NQA5 729 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 CISHQ9NSE2 258 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 COMMD8Q9NX08 183 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 HMGXB4Q9UGU5 601 aa14.26□□□□□ -0.13
ACTN4-205ENST00000477174 ARIH1Q9Y4X5 557 aaPredicted RBP14.26□□□□□ -0.13
ACTN4-205ENST00000477174 HEPACAM2A8MVW5 462 aa14.25□□□□□ -0.13
ACTN4-205ENST00000477174 AP1G2O75843 785 aa14.25□□□□□ -0.13
ACTN4-205ENST00000477174 RTN3O95197 1032 aaPredicted RBP14.25□□□□□ -0.13
ACTN4-205ENST00000477174 PDGFBP01127 241 aaPredicted RBP14.25□□□□□ -0.13
ACTN4-205ENST00000477174 AFPP02771 609 aaKnown RBP14.25□□□□□ -0.13
ACTN4-205ENST00000477174 NPR3P17342 541 aa14.25□□□□□ -0.13
ACTN4-205ENST00000477174 PFKLP17858 780 aa14.25□□□□□ -0.13
ACTN4-205ENST00000477174 AVPR2P30518 371 aa14.25□□□□□ -0.13
ACTN4-205ENST00000477174 AVPR1AP37288 418 aa14.25□□□□□ -0.13
ACTN4-205ENST00000477174 CACNA2D1P54289 1103 aa14.25□□□□□ -0.13
ACTN4-205ENST00000477174 YWHAEP62258 255 aaKnown RBP14.25□□□□□ -0.13
ACTN4-205ENST00000477174 FCHO2Q0JRZ9 810 aa14.25□□□□□ -0.13
ACTN4-205ENST00000477174 CUL2Q13617 745 aa14.25□□□□□ -0.13
ACTN4-205ENST00000477174 DPCR1Q3MIW9 517 aa14.25□□□□□ -0.13
ACTN4-205ENST00000477174 SLC44A4Q53GD3 710 aa14.25□□□□□ -0.13
ACTN4-205ENST00000477174 TXNDC8Q6A555 127 aa14.25□□□□□ -0.13
ACTN4-205ENST00000477174 ASTLQ6HA08 431 aaPredicted RBP14.25□□□□□ -0.13
ACTN4-205ENST00000477174 PHLDB3Q6NSJ2 640 aa14.25□□□□□ -0.13
ACTN4-205ENST00000477174 VITQ6UXI7 678 aa14.25□□□□□ -0.13
ACTN4-205ENST00000477174 RBM43Q6ZSC3 357 aaKnown RBP14.25□□□□□ -0.13
ACTN4-205ENST00000477174 CELF5Q8N6W0 485 aaKnown RBP14.25□□□□□ -0.13
ACTN4-205ENST00000477174 MAB21L3Q8N8X9 362 aa14.25□□□□□ -0.13
ACTN4-205ENST00000477174 EHBP1Q8NDI1 1231 aa14.25□□□□□ -0.13
ACTN4-205ENST00000477174 STKLD1Q8NE28 680 aa14.25□□□□□ -0.13
ACTN4-205ENST00000477174 LMO3Q8TAP4 145 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms