RNA–Protein interactions for RNA: ENST00000476972.6

GMDS-204, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-204ENST00000476972 NCOA4Q13772 614 aa20.37■□□□□ 0.85
GMDS-204ENST00000476972 ZNF699Q32M78 642 aa20.37■□□□□ 0.85
GMDS-204ENST00000476972 CFAP221Q4G0U5 840 aa20.37■□□□□ 0.85
GMDS-204ENST00000476972 C1orf220Q5T0J3 134 aa20.37■□□□□ 0.85
GMDS-204ENST00000476972 FAM171BQ6P995 826 aa20.37■□□□□ 0.85
GMDS-204ENST00000476972 SPATA2LQ8IUW3 424 aaPredicted RBP20.37■□□□□ 0.85
GMDS-204ENST00000476972 ARID3BQ8IVW6 561 aaPredicted RBP20.37■□□□□ 0.85
GMDS-204ENST00000476972 STKLD1Q8NE28 680 aa20.37■□□□□ 0.85
GMDS-204ENST00000476972 CSGALNACT1Q8TDX6 532 aa20.37■□□□□ 0.85
GMDS-204ENST00000476972 GSDMAQ96QA5 445 aa20.37■□□□□ 0.85
GMDS-204ENST00000476972 IER2Q9BTL4 223 aa20.37■□□□□ 0.85
GMDS-204ENST00000476972 ATXN3LQ9H3M9 355 aa20.37■□□□□ 0.85
GMDS-204ENST00000476972 VRTNQ9H8Y1 702 aa20.37■□□□□ 0.85
GMDS-204ENST00000476972 IL21Q9HBE4 155 aa20.37■□□□□ 0.85
GMDS-204ENST00000476972 CRTAC1Q9NQ79 661 aa20.37■□□□□ 0.85
GMDS-204ENST00000476972 NME7Q9Y5B8 376 aa20.37■□□□□ 0.85
GMDS-204ENST00000476972 PCDHA5Q9Y5H7 936 aa20.37■□□□□ 0.85
GMDS-204ENST00000476972 COL4A2P08572 1712 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 DENND4CQ5VZ89 1909 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 CHADO15335 359 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 GADD45BO75293 160 aaPredicted RBP20.36■□□□□ 0.85
GMDS-204ENST00000476972 CLSTN1O94985 981 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 SMC2O95347 1197 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 PDGFRBP09619 1106 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 CXCL12P48061 93 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 CCR3P51677 355 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 MLLT6P55198 1093 aaPredicted RBP20.36■□□□□ 0.85
GMDS-204ENST00000476972 GAS6Q14393 721 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 PPP2R5DQ14738 602 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 TAF12Q16514 161 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 ZACNQ401N2 412 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 ZNF658Q5TYW1 1059 aaPredicted RBP20.36■□□□□ 0.85
GMDS-204ENST00000476972 SDHAF4Q5VUM1 108 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 FAM186BQ8IYM0 893 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 SPATA20Q8TB22 786 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 SMARCE1Q969G3 411 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 MYLPFQ96A32 169 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 ELMO3Q96BJ8 720 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 FUBP3Q96I24 572 aaKnown RBP eCLIP20.36■□□□□ 0.85
GMDS-204ENST00000476972 LRRC3BQ96PB8 259 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 MKNK1Q9BUB5 465 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 SNX25Q9H3E2 840 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 SMYD3Q9H7B4 428 aa20.36■□□□□ 0.85
GMDS-204ENST00000476972 HOOK1Q9UJC3 728 aaKnown RBP20.36■□□□□ 0.85
GMDS-204ENST00000476972 SLC38A8A6NNN8 435 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 HMGA1P17096 107 aaKnown RBP20.35■□□□□ 0.85
GMDS-204ENST00000476972 SDHBP21912 280 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 RPL13P26373 211 aaKnown RBP20.35■□□□□ 0.85
GMDS-204ENST00000476972 CDC25CP30307 473 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 PRCPP42785 496 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 SOX9P48436 509 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 VAMP7P51809 220 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 KPNA1P52294 538 aaPredicted RBP20.35■□□□□ 0.85
GMDS-204ENST00000476972 ATXN1P54253 815 aaKnown RBP20.35■□□□□ 0.85
GMDS-204ENST00000476972 CYP4F8P98187 520 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 SATB1Q01826 763 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 FCHO2Q0JRZ9 810 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 ADAM9Q13443 819 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 LPAL2Q16609 132 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 DDR2Q16832 855 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 EDRF1Q3B7T1 1238 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 GPR158Q5T848 1215 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 C4orf50Q6ZRC1 276 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 INTS8Q75QN2 995 aaKnown RBP20.35■□□□□ 0.85
GMDS-204ENST00000476972 OR6B3Q8NGW1 331 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 GCNAQ96QF7 691 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 USP18Q9UMW8 372 aa20.35■□□□□ 0.85
GMDS-204ENST00000476972 PRR5-ARHGAP8B1AHC4 643 aa20.34■□□□□ 0.85
GMDS-204ENST00000476972 IKBKBO14920 756 aa20.34■□□□□ 0.85
GMDS-204ENST00000476972 FAM163BP0C2L3 166 aa20.34■□□□□ 0.85
GMDS-204ENST00000476972 TRIM49P0CI25 452 aa20.34■□□□□ 0.85
GMDS-204ENST00000476972 TRIM49CP0CI26 452 aa20.34■□□□□ 0.85
GMDS-204ENST00000476972 PSMC2P35998 433 aaKnown RBP20.34■□□□□ 0.85
GMDS-204ENST00000476972 GNL1P36915 607 aaPredicted RBP20.34■□□□□ 0.85
GMDS-204ENST00000476972 RPL10AP62906 217 aaKnown RBP20.34■□□□□ 0.85
GMDS-204ENST00000476972 ARHGAP8P85298 464 aa20.34■□□□□ 0.85
GMDS-204ENST00000476972 MAPRE1Q15691 268 aaKnown RBP20.34■□□□□ 0.85
GMDS-204ENST00000476972 ARHGAP15Q53QZ3 475 aa20.34■□□□□ 0.85
GMDS-204ENST00000476972 COBLL1Q53SF7 1204 aa20.34■□□□□ 0.85
GMDS-204ENST00000476972 ZNF667Q5HYK9 610 aa20.34■□□□□ 0.85
GMDS-204ENST00000476972 SCARA5Q6ZMJ2 495 aa20.34■□□□□ 0.85
GMDS-204ENST00000476972 SV2AQ7L0J3 742 aa20.34■□□□□ 0.85
GMDS-204ENST00000476972 CELF5Q8N6W0 485 aaKnown RBP20.34■□□□□ 0.85
GMDS-204ENST00000476972 TTC8Q8TAM2 541 aa20.34■□□□□ 0.85
GMDS-204ENST00000476972 DPEP3Q9H4B8 488 aa20.34■□□□□ 0.85
GMDS-204ENST00000476972 C8orf33Q9H7E9 229 aaPredicted RBP20.34■□□□□ 0.85
GMDS-204ENST00000476972 PARD6AQ9NPB6 346 aa20.34■□□□□ 0.85
GMDS-204ENST00000476972 RBM12Q9NTZ6 932 aaKnown RBP20.34■□□□□ 0.85
GMDS-204ENST00000476972 GMEB2Q9UKD1 530 aa20.34■□□□□ 0.85
GMDS-204ENST00000476972 TICRRQ7Z2Z1 1910 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 CSH1P0DML2 217 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 CSH2P0DML3 217 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 KRT13P13646 458 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 PIK3CAP42336 1068 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 MAGEA11P43364 429 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 RAP1GAPP47736 663 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 CYP27A1Q02318 531 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 LMNB2Q03252 620 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 MDH1BQ5I0G3 518 aa20.33■□□□□ 0.85
GMDS-204ENST00000476972 TMEM150AQ86TG1 271 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms