RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 BDNFP23560 247 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 LMO2P25791 158 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 VIPR2P41587 438 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 MXI1P50539 228 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 KPNA1P52294 538 aaPredicted RBP10.88□□□□□ -0.67
CCM2-208ENST00000476594 MLLT6P55198 1093 aaPredicted RBP10.88□□□□□ -0.67
CCM2-208ENST00000476594 FCHO2Q0JRZ9 810 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 PPP2R5DQ14738 602 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 WDR44Q5JSH3 913 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 KRT39Q6A163 491 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 ZC3H14Q6PJT7 736 aaKnown RBP10.88□□□□□ -0.67
CCM2-208ENST00000476594 SCARA5Q6ZMJ2 495 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 PIP4P2Q8N4L2 257 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 PDZD8Q8NEN9 1154 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 PCED1BQ96HM7 432 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 C8orf48Q96LL4 319 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 ZSWIM3Q96MP5 696 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 SLITRK1Q96PX8 696 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 MED10Q9BTT4 135 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 FAM124BQ9H5Z6 455 aaPredicted RBP10.88□□□□□ -0.67
CCM2-208ENST00000476594 CYP3A43Q9HB55 503 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 IL21Q9HBE4 155 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 LTB4R2Q9NPC1 389 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 CRTAC1Q9NQ79 661 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 TRPM5Q9NZQ8 1165 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 PCDHA5Q9Y5H7 936 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 PIEZO1Q92508 2521 aa10.88□□□□□ -0.67
CCM2-208ENST00000476594 CACNA1HO95180 2353 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 FAM170BA6NMN3 283 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 RTN3O95197 1032 aaPredicted RBP10.87□□□□□ -0.67
CCM2-208ENST00000476594 ASS1P00966 412 aaKnown RBP10.87□□□□□ -0.67
CCM2-208ENST00000476594 F11P03951 625 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 CKMP06732 381 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 USP17L7P0C7H9 530 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 HMGA1P17096 107 aaKnown RBP10.87□□□□□ -0.67
CCM2-208ENST00000476594 PRCPP42785 496 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 GCLMP48507 274 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 UBE2HP62256 183 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 NOP14P78316 857 aaKnown RBP10.87□□□□□ -0.67
CCM2-208ENST00000476594 DLG4P78352 724 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 CETN1Q12798 172 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 LRRC32Q14392 662 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 ZNF268Q14587 947 aaPredicted RBP10.87□□□□□ -0.67
CCM2-208ENST00000476594 ZCWPW2Q504Y3 356 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 TCERG1LQ5VWI1 586 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 MON1AQ86VX9 555 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 MAB21L3Q8N8X9 362 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 STKLD1Q8NE28 680 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 SPATA20Q8TB22 786 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 PLEKHO2Q8TD55 490 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 SMARCD1Q96GM5 515 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 DHTKD1Q96HY7 919 aaPredicted RBP10.87□□□□□ -0.67
CCM2-208ENST00000476594 DDX23Q9BUQ8 820 aaKnown RBP10.87□□□□□ -0.67
CCM2-208ENST00000476594 PLA2G2FQ9BZM2 168 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 NIF3L1Q9GZT8 377 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 GZF1Q9H116 711 aaPredicted RBP10.87□□□□□ -0.67
CCM2-208ENST00000476594 SMYD3Q9H7B4 428 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 MMRN2Q9H8L6 949 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 METTL14Q9HCE5 456 aaKnown RBP10.87□□□□□ -0.67
CCM2-208ENST00000476594 TRPC7Q9HCX4 862 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 DMAP1Q9NPF5 467 aaPredicted RBP10.87□□□□□ -0.67
CCM2-208ENST00000476594 HEBP1Q9NRV9 189 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 TDP1Q9NUW8 608 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 PIAS3Q9Y6X2 628 aa10.87□□□□□ -0.67
CCM2-208ENST00000476594 F8VP50 259 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 H0Y858 1186 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 LAMTOR5O43504 91 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 ATP2C2O75185 946 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 VNN1O95497 513 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 FGFR1OPO95684 399 aaKnown RBP10.86□□□□□ -0.67
CCM2-208ENST00000476594 TRIM49P0CI25 452 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 TRIM49CP0CI26 452 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 CCNE1P24864 410 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 RPS9P46781 194 aaKnown RBP10.86□□□□□ -0.67
CCM2-208ENST00000476594 GPR15P49685 360 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 CDR1P51861 262 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 YWHAEP62258 255 aaKnown RBP10.86□□□□□ -0.67
CCM2-208ENST00000476594 TCF15Q12870 199 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 ANGPT1Q15389 498 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 DCAF17Q5H9S7 520 aaPredicted RBP10.86□□□□□ -0.67
CCM2-208ENST00000476594 STXBP5Q5T5C0 1151 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 SDHAF4Q5VUM1 108 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 SMYD4Q8IYR2 804 aaPredicted RBP10.86□□□□□ -0.67
CCM2-208ENST00000476594 ADSSL1Q8N142 457 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 NUP93Q8N1F7 819 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 TRIML1Q8N9V2 468 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 FBXL13Q8NEE6 735 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 OVCA2Q8WZ82 227 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 FAM3CQ92520 227 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 CEP63Q96MT8 703 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 NT5C1AQ9BXI3 368 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 FOXQ1Q9C009 403 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 COMMD8Q9NX08 183 aa10.86□□□□□ -0.67
CCM2-208ENST00000476594 ARMCX3Q9UH62 379 aaPredicted RBP10.86□□□□□ -0.67
CCM2-208ENST00000476594 NUP210Q8TEM1 1887 aaPredicted RBP10.86□□□□□ -0.67
CCM2-208ENST00000476594 HCRTO43612 131 aa10.85□□□□□ -0.67
CCM2-208ENST00000476594 PI15O43692 258 aa10.85□□□□□ -0.67
CCM2-208ENST00000476594 DCNP07585 359 aaKnown RBP10.85□□□□□ -0.67
CCM2-208ENST00000476594 SLC8A3P57103 927 aa10.85□□□□□ -0.67
CCM2-208ENST00000476594 NR1H3Q13133 447 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms