RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 CIZ1Q9ULV3 898 aaPredicted RBP17.69■□□□□ 0.42
APOBEC3F-203ENST00000476513 LIMCH1Q9UPQ0 1083 aa17.69■□□□□ 0.42
APOBEC3F-203ENST00000476513 MYH11P35749 1972 aa17.69■□□□□ 0.42
APOBEC3F-203ENST00000476513 MYO16Q9Y6X6 1858 aa17.69■□□□□ 0.42
APOBEC3F-203ENST00000476513 PCNX2A6NKB5 2137 aa17.68■□□□□ 0.42
APOBEC3F-203ENST00000476513 UPK3BL1B0FP48 263 aa17.68■□□□□ 0.42
APOBEC3F-203ENST00000476513 TISP43B9A030 160 aa17.68■□□□□ 0.42
APOBEC3F-203ENST00000476513 UPK3BL2E5RIL1 263 aa17.68■□□□□ 0.42
APOBEC3F-203ENST00000476513 MAP3K13O43283 966 aa17.68■□□□□ 0.42
APOBEC3F-203ENST00000476513 ALDH1A2O94788 518 aa17.68■□□□□ 0.42
APOBEC3F-203ENST00000476513 NFATC1O95644 943 aa17.68■□□□□ 0.42
APOBEC3F-203ENST00000476513 TCF3P15923 654 aa17.68■□□□□ 0.42
APOBEC3F-203ENST00000476513 MRPS21P82921 87 aaKnown RBP17.68■□□□□ 0.42
APOBEC3F-203ENST00000476513 HMGN5P82970 282 aaKnown RBP17.68■□□□□ 0.42
APOBEC3F-203ENST00000476513 ADALQ6DHV7 355 aa17.68■□□□□ 0.42
APOBEC3F-203ENST00000476513 FAM184AQ8NB25 1140 aa17.68■□□□□ 0.42
APOBEC3F-203ENST00000476513 PKMYT1Q99640 499 aa17.68■□□□□ 0.42
APOBEC3F-203ENST00000476513 ACBD6Q9BR61 282 aa17.68■□□□□ 0.42
APOBEC3F-203ENST00000476513 MBD1Q9UIS9 605 aaPredicted RBP17.68■□□□□ 0.42
APOBEC3F-203ENST00000476513 ARHGAP26Q9UNA1 814 aa17.68■□□□□ 0.42
APOBEC3F-203ENST00000476513 TRAK2O60296 914 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 FAM13AO94988 1023 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 CHRM1P11229 460 aaPredicted RBP17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 HDCP19113 662 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 ACAT1P24752 427 aaKnown RBP17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 ZNF131P52739 623 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 ZXDBP98169 803 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 ATP2C1P98194 919 aaPredicted RBP17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 KCNB1Q14721 858 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 CCDC142Q17RM4 750 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 INTS6LQ5JSJ4 861 aaKnown RBP17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 SLC23A3Q6PIS1 610 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 GPBP1Q86WP2 473 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 SFTPA1Q8IWL2 248 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 ALLCQ8N6M5 410 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 WHAMMQ8TF30 809 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 SPACA7Q96KW9 195 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 ZNF560Q96MR9 790 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 FIZ1Q96SL8 496 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 PARVGQ9HBI0 331 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 DDX43Q9NXZ2 648 aaKnown RBP17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 L1RE1Q9UN81 338 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 ATXN2Q99700 1313 aaKnown RBP17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 GON4LQ3T8J9 2241 aa17.67■□□□□ 0.42
APOBEC3F-203ENST00000476513 FAM221BA6H8Z2 402 aa17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 SGK1O00141 431 aa17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 KLF8O95600 359 aaPredicted RBP17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 CAPNS1P04632 268 aa17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 FAM193AP78312 1265 aa17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 GTF2BQ00403 316 aa17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 MESP2Q0VG99 397 aa17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 LYSMD4Q5XG99 296 aa17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 CRELD2Q6UXH1 353 aaPredicted RBP17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 PROSER1Q86XN7 944 aa17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 CHCHD4Q8N4Q1 142 aa17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 FSIP1Q8NA03 581 aa17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 IL17RCQ8NAC3 791 aa17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 TXNDC5Q8NBS9 432 aaKnown RBP17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 FSCN3Q9NQT6 498 aa17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 PILRBQ9UKJ0 227 aa17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 GTF3C4Q9UKN8 822 aa17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 AGO2Q9UKV8 859 aaKnown RBP17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 STYXL1Q9Y6J8 313 aa17.66■□□□□ 0.42
APOBEC3F-203ENST00000476513 VWA3AA6NCI4 1184 aa17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 H0Y626 953 aa17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 TRIM16O95361 564 aa17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 CYP17A1P05093 508 aa17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 CFIP05156 583 aa17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 ITPKAP23677 461 aa17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 PNPLA4P41247 253 aa17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 DPP6P42658 865 aa17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 POU5F1Q01860 360 aaKnown RBP17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 DHX8Q14562 1220 aaKnown RBP17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 MAP7D1Q3KQU3 841 aa17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 CFAP221Q4G0U5 840 aa17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 SPDYCQ5MJ68 293 aa17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 PEAR1Q5VY43 1037 aaPredicted RBP17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 SLFN12LQ6IEE8 588 aa17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 SCN4BQ8IWT1 228 aa17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 IKZF4Q9H2S9 585 aa17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 BCCIPQ9P287 314 aaKnown RBP eCLIP17.65■□□□□ 0.42
APOBEC3F-203ENST00000476513 MYMKA6NI61 221 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 LEFTY2O00292 366 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 HUS1O60921 280 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 POLR2BP30876 1174 aaKnown RBP17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 RDXP35241 583 aaKnown RBP17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 TIE1P35590 1138 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 SLC6A11P48066 632 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 ATXN3P54252 364 aaPredicted RBP17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 MYL7Q01449 175 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 HSF5Q4G112 596 aaPredicted RBP17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 EMC10Q5UCC4 262 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 LMBRD2Q68DH5 695 aaPredicted RBP17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 OSTM1Q86WC4 334 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 NT5DC4Q86YG4 428 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 SPATA2LQ8IUW3 424 aaPredicted RBP17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 ADGRG2Q8IZP9 1017 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 TMEM86AQ8N2M4 240 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 HDDC3Q8N4P3 179 aa17.64■□□□□ 0.41
APOBEC3F-203ENST00000476513 SPATA18Q8TC71 538 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms