RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 DNMT3BQ9UBC3 853 aaKnown RBP16.08■□□□□ 0.16
SNX13-207ENST00000475800 LIMA1Q9UHB6 759 aaKnown RBP16.08■□□□□ 0.16
SNX13-207ENST00000475800 ZNF638Q14966 1978 aaKnown RBP16.07■□□□□ 0.16
SNX13-207ENST00000475800 RHOP08100 348 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 CSH1P0DML2 217 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 CSH2P0DML3 217 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 CYP2F1P24903 491 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 ANXA13P27216 316 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 TPM4P67936 248 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 TAF12Q16514 161 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 FKBP15Q5T1M5 1219 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 CYP4A22Q5TCH4 519 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 BMP8AQ7Z5Y6 402 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 DHX40Q8IX18 779 aaKnown RBP16.07■□□□□ 0.16
SNX13-207ENST00000475800 PLCD3Q8N3E9 789 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 FAM200AQ8TCP9 573 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 ASIC4Q96FT7 647 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 SMARCD1Q96GM5 515 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 ARID3AQ99856 593 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 CRACR2AQ9BSW2 395 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 KCNH6Q9H252 994 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 TAB2Q9NYJ8 693 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 CEP72Q9P209 647 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 LIMD1Q9UGP4 676 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 HMGXB4Q9UGU5 601 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 ZFP37Q9Y6Q3 630 aaPredicted RBP16.07■□□□□ 0.16
SNX13-207ENST00000475800 DENND4CQ5VZ89 1909 aa16.07■□□□□ 0.16
SNX13-207ENST00000475800 LRRC10BA6NIK2 292 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 MICAL2O94851 1124 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 ATF6P18850 670 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 BDNFP23560 247 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 FSHRP23945 695 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 PON1P27169 355 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 GRIK1P39086 918 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 EPHA5P54756 1037 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 MFAP3P55082 362 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 PDZD4Q76G19 769 aaPredicted RBP16.06■□□□□ 0.16
SNX13-207ENST00000475800 SCN4BQ8IWT1 228 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 TDRD5Q8NAT2 981 aaKnown RBP16.06■□□□□ 0.16
SNX13-207ENST00000475800 WHAMMQ8TF30 809 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 TMEM176AQ96HP8 235 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 SPATA17Q96L03 361 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 C8orf48Q96LL4 319 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 CORO1BQ9BR76 489 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 MED10Q9BTT4 135 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 B3GNT5Q9BYG0 378 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 EHD2Q9NZN4 543 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 UXTQ9UBK9 157 aaPredicted RBP16.06■□□□□ 0.16
SNX13-207ENST00000475800 APEX2Q9UBZ4 518 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 KIAA1257Q9ULG3 409 aa16.06■□□□□ 0.16
SNX13-207ENST00000475800 SOAT2O75908 522 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 PAEPP09466 180 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 RFX1P22670 979 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 AVPR2P30518 371 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 COPB1P53618 953 aaKnown RBP16.05■□□□□ 0.16
SNX13-207ENST00000475800 RAD23BP54727 409 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 PTPN5P54829 565 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 TCF15Q12870 199 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 IQCB1Q15051 598 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 CCDC142Q17RM4 750 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 PHLDB3Q6NSJ2 640 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 DNAJB7Q7Z6W7 309 aaPredicted RBP16.05■□□□□ 0.16
SNX13-207ENST00000475800 FAM35AQ86V20 835 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 ARHGEF19Q8IW93 802 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 UBR7Q8N806 425 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 HEXIM2Q96MH2 286 aaKnown RBP16.05■□□□□ 0.16
SNX13-207ENST00000475800 TWNKQ96RR1 684 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 HNRNPABQ99729 332 aaKnown RBP16.05■□□□□ 0.16
SNX13-207ENST00000475800 VPS16Q9H269 839 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 HSD3B7Q9H2F3 369 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 UBE2TQ9NPD8 197 aaPredicted RBP16.05■□□□□ 0.16
SNX13-207ENST00000475800 DMAP1Q9NPF5 467 aaPredicted RBP16.05■□□□□ 0.16
SNX13-207ENST00000475800 HCFC1R1Q9NWW0 138 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 MRPS23Q9Y3D9 190 aaKnown RBP16.05■□□□□ 0.16
SNX13-207ENST00000475800 DAAM1Q9Y4D1 1078 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 PCDHB4Q9Y5E5 795 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 KMT2EQ8IZD2 1858 aa16.05■□□□□ 0.16
SNX13-207ENST00000475800 LGALS16A8MUM7 142 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 H0Y858 1186 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 SLC9A1P19634 815 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 CDC25CP30307 473 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 MTMR3Q13615 1198 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 DDR2Q16832 855 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 ZNF394Q53GI3 561 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 TMEM270Q6UE05 265 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 RRAGAQ7L523 313 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 GET4Q7L5D6 327 aaPredicted RBP16.04■□□□□ 0.16
SNX13-207ENST00000475800 ZDHHC14Q8IZN3 488 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 FUKQ8N0W3 1084 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 SLC4A11Q8NBS3 891 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 SLC2A14Q8TDB8 520 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 ATOH1Q92858 354 aaPredicted RBP16.04■□□□□ 0.16
SNX13-207ENST00000475800 CYFIP2Q96F07 1278 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 TRMT2BQ96GJ1 504 aaKnown RBP16.04■□□□□ 0.16
SNX13-207ENST00000475800 GCNAQ96QF7 691 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 LPIN3Q9BQK8 851 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 ZNF518BQ9C0D4 1074 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 CBX8Q9HC52 389 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 FAM49BQ9NUQ9 324 aa16.04■□□□□ 0.16
SNX13-207ENST00000475800 ZMYM5Q9UJ78 669 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms