RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 SLC38A8A6NNN8 435 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 LRRIQ3A6PVS8 624 aaPredicted RBP10.07□□□□□ -0.8
PDPN-204ENST00000475043 NCAM2O15394 837 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 RHOBTB3O94955 611 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 PRAMEF12O95522 483 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 GLULP15104 373 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 HMGA1P17096 107 aaKnown RBP10.07□□□□□ -0.8
PDPN-204ENST00000475043 WARSP23381 471 aaKnown RBP10.07□□□□□ -0.8
PDPN-204ENST00000475043 TARSP26639 723 aaKnown RBP10.07□□□□□ -0.8
PDPN-204ENST00000475043 ATICP31939 592 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 GNL1P36915 607 aaPredicted RBP10.07□□□□□ -0.8
PDPN-204ENST00000475043 AVPR1AP37288 418 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 GRIK1P39086 918 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 KPNA1P52294 538 aaPredicted RBP10.07□□□□□ -0.8
PDPN-204ENST00000475043 AP3M2P53677 418 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 NLRP12P59046 1061 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 DLG4P78352 724 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 DPYDQ12882 1025 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 MAPRE1Q15691 268 aaKnown RBP10.07□□□□□ -0.8
PDPN-204ENST00000475043 ZNF699Q32M78 642 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 CFAP221Q4G0U5 840 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 TDRD10Q5VZ19 366 aaKnown RBP10.07□□□□□ -0.8
PDPN-204ENST00000475043 FAM171BQ6P995 826 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 LIMS2Q7Z4I7 341 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 FRMD5Q7Z6J6 570 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 SLC9A9Q8IVB4 645 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 C1orf210Q8IVY1 113 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 MAB21L3Q8N8X9 362 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 TTC16Q8NEE8 873 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 PLEKHO2Q8TD55 490 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 MRPS31Q92665 395 aaKnown RBP10.07□□□□□ -0.8
PDPN-204ENST00000475043 MYLPFQ96A32 169 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 FUBP3Q96I24 572 aaKnown RBP eCLIP10.07□□□□□ -0.8
PDPN-204ENST00000475043 ZFYVE19Q96K21 471 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 NELL2Q99435 816 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 MKNK1Q9BUB5 465 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 SLC46A2Q9BY10 475 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 SMG9Q9H0W8 520 aaKnown RBP10.07□□□□□ -0.8
PDPN-204ENST00000475043 GZF1Q9H116 711 aaPredicted RBP10.07□□□□□ -0.8
PDPN-204ENST00000475043 DMAC2Q9NW81 257 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 SPATA6Q9NWH7 488 aaPredicted RBP10.07□□□□□ -0.8
PDPN-204ENST00000475043 DLGAP2Q9P1A6 1054 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 UXTQ9UBK9 157 aaPredicted RBP10.07□□□□□ -0.8
PDPN-204ENST00000475043 PIAS3Q9Y6X2 628 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 PTPRDP23468 1912 aa10.07□□□□□ -0.8
PDPN-204ENST00000475043 GREB1Q4ZG55 1949 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 A8MXQ7 604 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 MAN2B1O00754 1011 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 CHADO15335 359 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 GFRA3O60609 400 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 TACC1O75410 805 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 F11P03951 625 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 BDNFP23560 247 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 NR2F2P24468 414 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 ANXA13P27216 316 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 FCHO2Q0JRZ9 810 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 NCOA4Q13772 614 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 KCNB1Q14721 858 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 ARHGAP29Q52LW3 1261 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 ZNF667Q5HYK9 610 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 MDH1BQ5I0G3 518 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 TXNDC8Q6A555 127 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 SCARA5Q6ZMJ2 495 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 CMTM8Q8IZV2 173 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 CELF5Q8N6W0 485 aaKnown RBP10.06□□□□□ -0.8
PDPN-204ENST00000475043 TTC8Q8TAM2 541 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 MYCBPAPQ8TBZ2 947 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 BPIFB1Q8TDL5 484 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 FAM3CQ92520 227 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 ELMO3Q96BJ8 720 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 PCED1BQ96HM7 432 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 OSBPL6Q9BZF3 934 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 XYLT2Q9H1B5 865 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 TRPC7Q9HCX4 862 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 CRTAC1Q9NQ79 661 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 TRPV5Q9NQA5 729 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 THG1LQ9NWX6 298 aaKnown RBP10.06□□□□□ -0.8
PDPN-204ENST00000475043 ZMYM5Q9UJ78 669 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 TRAF3IP3Q9Y228 551 aa10.06□□□□□ -0.8
PDPN-204ENST00000475043 C3orf80F5H4A9 247 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 SMAPO00193 183 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 LAMTOR5O43504 91 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 NOL4O94818 638 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 VNN1O95497 513 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 STAU1O95793 577 aaKnown RBP10.05□□□□□ -0.8
PDPN-204ENST00000475043 C4BPAP04003 597 aaKnown RBP10.05□□□□□ -0.8
PDPN-204ENST00000475043 KRT13P13646 458 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 PTPN1P18031 435 aaKnown RBP10.05□□□□□ -0.8
PDPN-204ENST00000475043 CCNE1P24864 410 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 DDX6P26196 483 aaKnown RBP eCLIP10.05□□□□□ -0.8
PDPN-204ENST00000475043 RPL13P26373 211 aaKnown RBP10.05□□□□□ -0.8
PDPN-204ENST00000475043 NBL1P41271 181 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 MAGEA11P43364 429 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 RAP1GAPP47736 663 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 SOX9P48436 509 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 VAMP7P51809 220 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 CDH8P55286 799 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 CLDN10P78369 228 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 PNOCQ13519 176 aa10.05□□□□□ -0.8
PDPN-204ENST00000475043 VSTM1Q6UX27 236 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms