RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-223ENST00000474643 KCTD10Q9H3F6 313 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 PRMT8Q9NR22 394 aaPredicted RBP16.16■□□□□ 0.18
VARS-223ENST00000474643 TDP1Q9NUW8 608 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 EHD2Q9NZN4 543 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 SIX4Q9UIU6 781 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 GMEB2Q9UKD1 530 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 CDH9Q9ULB4 789 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 FRMD4BQ9Y2L6 1034 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 PATJQ8NI35 1801 aa16.16■□□□□ 0.18
VARS-223ENST00000474643 TRAV19A0A0A6YYK7 116 aa16.15■□□□□ 0.18
VARS-223ENST00000474643 ARNTLO00327 626 aa16.15■□□□□ 0.18
VARS-223ENST00000474643 PDGFRBP09619 1106 aa16.15■□□□□ 0.18
VARS-223ENST00000474643 RPL13P26373 211 aaKnown RBP16.15■□□□□ 0.18
VARS-223ENST00000474643 TNK2Q07912 1038 aa16.15■□□□□ 0.18
VARS-223ENST00000474643 CYP24A1Q07973 514 aa16.15■□□□□ 0.18
VARS-223ENST00000474643 BIRC3Q13489 604 aa16.15■□□□□ 0.18
VARS-223ENST00000474643 PON2Q15165 354 aa16.15■□□□□ 0.18
VARS-223ENST00000474643 SOWAHAQ2M3V2 549 aa16.15■□□□□ 0.18
VARS-223ENST00000474643 PRR23BQ6ZRT6 265 aa16.15■□□□□ 0.18
VARS-223ENST00000474643 TRAPPC11Q7Z392 1133 aa16.15■□□□□ 0.18
VARS-223ENST00000474643 ELOA2Q8IYF1 753 aaPredicted RBP16.15■□□□□ 0.18
VARS-223ENST00000474643 NUP210Q8TEM1 1887 aaPredicted RBP16.15■□□□□ 0.18
VARS-223ENST00000474643 TSG101Q99816 390 aa16.15■□□□□ 0.18
VARS-223ENST00000474643 IL21Q9HBE4 155 aa16.15■□□□□ 0.18
VARS-223ENST00000474643 GKN1Q9NS71 199 aa16.15■□□□□ 0.18
VARS-223ENST00000474643 LMBRD1Q9NUN5 540 aa16.15■□□□□ 0.18
VARS-223ENST00000474643 PTPRJQ12913 1337 aa16.15■□□□□ 0.18
VARS-223ENST00000474643 CACNA1IQ9P0X4 2223 aa16.14■□□□□ 0.17
VARS-223ENST00000474643 MYBPHLA2RUH7 354 aa16.14■□□□□ 0.17
VARS-223ENST00000474643 USP17L7P0C7H9 530 aa16.14■□□□□ 0.17
VARS-223ENST00000474643 HMGA1P17096 107 aaKnown RBP16.14■□□□□ 0.17
VARS-223ENST00000474643 WEE1P30291 646 aa16.14■□□□□ 0.17
VARS-223ENST00000474643 PDE6CP51160 858 aa16.14■□□□□ 0.17
VARS-223ENST00000474643 GRSF1Q12849 480 aaKnown RBP eCLIP16.14■□□□□ 0.17
VARS-223ENST00000474643 PSMD6Q15008 389 aa16.14■□□□□ 0.17
VARS-223ENST00000474643 CAMK4Q16566 473 aa16.14■□□□□ 0.17
VARS-223ENST00000474643 CFAP221Q4G0U5 840 aa16.14■□□□□ 0.17
VARS-223ENST00000474643 OSTM1Q86WC4 334 aa16.14■□□□□ 0.17
VARS-223ENST00000474643 SPEM1Q8N4L4 309 aa16.14■□□□□ 0.17
VARS-223ENST00000474643 OR6B3Q8NGW1 331 aa16.14■□□□□ 0.17
VARS-223ENST00000474643 MYLPFQ96A32 169 aa16.14■□□□□ 0.17
VARS-223ENST00000474643 RBM12Q9NTZ6 932 aaKnown RBP16.14■□□□□ 0.17
VARS-223ENST00000474643 NXF1Q9UBU9 619 aaKnown RBP16.14■□□□□ 0.17
VARS-223ENST00000474643 TRAF3IP3Q9Y228 551 aa16.14■□□□□ 0.17
VARS-223ENST00000474643 WDR87Q6ZQQ6 2873 aa16.14■□□□□ 0.17
VARS-223ENST00000474643 BIN1O00499 593 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 HCRTO43612 131 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 NOL4O94818 638 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 F11P03951 625 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 CHRNB1P11230 501 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 BDNFP23560 247 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 NR2F2P24468 414 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 GNL1P36915 607 aaPredicted RBP16.13■□□□□ 0.17
VARS-223ENST00000474643 PRCPP42785 496 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 IFNAR2P48551 515 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 FOXK2Q01167 660 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 SATB1Q01826 763 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 WDR72Q3MJ13 1102 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 MDH1BQ5I0G3 518 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 VSTM1Q6UX27 236 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 MON1AQ86VX9 555 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 SLC9A9Q8IVB4 645 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 CPA6Q8N4T0 437 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 GPR161Q8N6U8 529 aaKnown RBP16.13■□□□□ 0.17
VARS-223ENST00000474643 ZBTB44Q8NCP5 570 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 USP13Q92995 863 aaPredicted RBP16.13■□□□□ 0.17
VARS-223ENST00000474643 SYAP1Q96A49 352 aaPredicted RBP16.13■□□□□ 0.17
VARS-223ENST00000474643 TRMT2BQ96GJ1 504 aaKnown RBP16.13■□□□□ 0.17
VARS-223ENST00000474643 LRRC3BQ96PB8 259 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 EBF3Q9H4W6 596 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 MAN1B1Q9UKM7 699 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 USP18Q9UMW8 372 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 CCL26Q9Y258 94 aa16.13■□□□□ 0.17
VARS-223ENST00000474643 SOBPA7XYQ1 873 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 A8MXQ7 604 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 GABRDO14764 452 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 PSMA7O14818 248 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 TRIM66O15016 1216 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 ATP2C2O75185 946 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 MBD3O95983 291 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 ABL1P00519 1130 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 KRT13P13646 458 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 TRIM21P19474 475 aaKnown RBP16.12■□□□□ 0.17
VARS-223ENST00000474643 WARSP23381 471 aaKnown RBP16.12■□□□□ 0.17
VARS-223ENST00000474643 LMO2P25791 158 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 ADAM9Q13443 819 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 FZD5Q13467 585 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 RUNX3Q13761 415 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 PDGFRLQ15198 375 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 LPAL2Q16609 132 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 HEATR6Q6AI08 1181 aaKnown RBP16.12■□□□□ 0.17
VARS-223ENST00000474643 TRIM68Q6AZZ1 485 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 CEP68Q76N32 757 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 DCLK2Q8N568 766 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 SUMF1Q8NBK3 374 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 SPATA20Q8TB22 786 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 EPC1Q9H2F5 836 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 DMAC2Q9NW81 257 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 TRPM5Q9NZQ8 1165 aa16.12■□□□□ 0.17
VARS-223ENST00000474643 ATP8B3O60423 1300 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms