RNA–Protein interactions for RNA: ENST00000473720.5

SMPD4-217, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 555 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-217ENST00000473720 MLLT6P55198 1093 aaPredicted RBP12.78□□□□□ -0.36
SMPD4-217ENST00000473720 TNNC1P63316 161 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 CYP24A1Q07973 514 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 TRPC3Q13507 836 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 RSPO4Q2I0M5 234 aaPredicted RBP12.78□□□□□ -0.36
SMPD4-217ENST00000473720 MDH1BQ5I0G3 518 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 DGLUCYQ7Z3D6 616 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 CEP57L1Q8IYX8 460 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 ARL14EPQ8N8R7 260 aaPredicted RBP12.78□□□□□ -0.36
SMPD4-217ENST00000473720 FSIP1Q8NA03 581 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 XXYLT1Q8NBI6 393 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 SCFD1Q8WVM8 642 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 NELL1Q92832 810 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 ELMO3Q96BJ8 720 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 SLC22A12Q96S37 553 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 CGRRF1Q99675 332 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 MRPL45Q9BRJ2 306 aaKnown RBP12.78□□□□□ -0.36
SMPD4-217ENST00000473720 IER2Q9BTL4 223 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 MAGEF1Q9HAY2 307 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 CRTAC1Q9NQ79 661 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 HPS4Q9NQG7 708 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 NXF1Q9UBU9 619 aaKnown RBP12.78□□□□□ -0.36
SMPD4-217ENST00000473720 ZMYM5Q9UJ78 669 aa12.78□□□□□ -0.36
SMPD4-217ENST00000473720 TRAV19A0A0A6YYK7 116 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 EXOC3O60645 756 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 NOL4O94818 638 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 USP17L7P0C7H9 530 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 GNL1P36915 607 aaPredicted RBP12.77□□□□□ -0.37
SMPD4-217ENST00000473720 PXNP49023 591 aaPredicted RBP12.77□□□□□ -0.37
SMPD4-217ENST00000473720 CASP4P49662 377 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 SPEM2Q0P670 501 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 PSMD2Q13200 908 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 SIM2Q14190 667 aaPredicted RBP12.77□□□□□ -0.37
SMPD4-217ENST00000473720 KCNB1Q14721 858 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 PSMD6Q15008 389 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 WDR72Q3MJ13 1102 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 CFAP221Q4G0U5 840 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 RESP18Q5W5W9 173 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 PKN3Q6P5Z2 889 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 FAM171BQ6P995 826 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 DPH6Q7L8W6 267 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 MON1AQ86VX9 555 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 SPATA18Q8TC71 538 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 FUBP3Q96I24 572 aaKnown RBP eCLIP12.77□□□□□ -0.37
SMPD4-217ENST00000473720 FAM83CQ9BQN1 747 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 KIF9Q9HAQ2 790 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 DUS2Q9NX74 493 aaKnown RBP12.77□□□□□ -0.37
SMPD4-217ENST00000473720 CFAP45Q9UL16 551 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 WNT6Q9Y6F9 365 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 UBE4BO95155 1302 aa12.77□□□□□ -0.37
SMPD4-217ENST00000473720 EGFP01133 1207 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 WARSP23381 471 aaKnown RBP12.76□□□□□ -0.37
SMPD4-217ENST00000473720 IFNAR2P48551 515 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 MYL6P60660 151 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 USP46P62068 366 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 FAM160A1Q05DH4 1040 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 GRSF1Q12849 480 aaKnown RBP eCLIP12.76□□□□□ -0.37
SMPD4-217ENST00000473720 BIRC3Q13489 604 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 CCINQ13939 588 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 MTF1Q14872 753 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 MAPRE1Q15691 268 aaKnown RBP12.76□□□□□ -0.37
SMPD4-217ENST00000473720 KNOP1Q1ED39 458 aaKnown RBP12.76□□□□□ -0.37
SMPD4-217ENST00000473720 NAIF1Q69YI7 327 aaPredicted RBP12.76□□□□□ -0.37
SMPD4-217ENST00000473720 FSTL4Q6MZW2 842 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 CNNM4Q6P4Q7 775 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 SCARA5Q6ZMJ2 495 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 CEP68Q76N32 757 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 ERMP1Q7Z2K6 904 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.76□□□□□ -0.37
SMPD4-217ENST00000473720 ZNF516Q92618 1163 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 CHFRQ96EP1 664 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 TRMT2BQ96GJ1 504 aaKnown RBP12.76□□□□□ -0.37
SMPD4-217ENST00000473720 PCED1BQ96HM7 432 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 CHAMP1Q96JM3 812 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 DPEP3Q9H4B8 488 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 EXOC1Q9NV70 894 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 POLR3BQ9NW08 1133 aaPredicted RBP12.76□□□□□ -0.37
SMPD4-217ENST00000473720 ABCA7Q8IZY2 2146 aa12.76□□□□□ -0.37
SMPD4-217ENST00000473720 A0A1B0GVL5 298 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 PVALEFA0A1B0GWK0 134 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 A8MXQ7 604 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 F8VP50 259 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 K7ESF4 209 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 CLDN5O00501 218 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 HRO43593 1189 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 ZNF292O60281 2723 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 PTPN1P18031 435 aaKnown RBP12.75□□□□□ -0.37
SMPD4-217ENST00000473720 HDCP19113 662 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 MAGEA11P43364 429 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 RAP1GAPP47736 663 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 CDH8P55286 799 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 FOXK2Q01167 660 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 EHHADHQ08426 723 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 PUM1Q14671 1186 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMPD4-217ENST00000473720 ZNF77Q15935 545 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 MAMSTRQ6ZN01 415 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 WDR87Q6ZQQ6 2873 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 DENND5BQ6ZUT9 1274 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 LONP2Q86WA8 852 aa12.75□□□□□ -0.37
SMPD4-217ENST00000473720 CPA6Q8N4T0 437 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms