RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 KIAA1257Q9ULG3 409 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 SNX12Q9UMY4 172 aa15.63■□□□□ 0.09
LMNA-213ENST00000473598 EIF3HO15372 352 aaKnown RBP eCLIP15.62■□□□□ 0.09
LMNA-213ENST00000473598 HOXA2O43364 376 aa15.62■□□□□ 0.09
LMNA-213ENST00000473598 DDHD2O94830 711 aa15.62■□□□□ 0.09
LMNA-213ENST00000473598 WARSP23381 471 aaKnown RBP15.62■□□□□ 0.09
LMNA-213ENST00000473598 PAX3P23760 479 aa15.62■□□□□ 0.09
LMNA-213ENST00000473598 VSNL1P62760 191 aa15.62■□□□□ 0.09
LMNA-213ENST00000473598 NOMO3P69849 1222 aa15.62■□□□□ 0.09
LMNA-213ENST00000473598 SHHQ15465 462 aa15.62■□□□□ 0.09
LMNA-213ENST00000473598 PRPF38BQ5VTL8 546 aaKnown RBP15.62■□□□□ 0.09
LMNA-213ENST00000473598 MICALCLQ6ZW33 695 aa15.62■□□□□ 0.09
LMNA-213ENST00000473598 ZNF280BQ86YH2 543 aa15.62■□□□□ 0.09
LMNA-213ENST00000473598 ADGRF2Q8IZF7 708 aa15.62■□□□□ 0.09
LMNA-213ENST00000473598 NOA1Q8NC60 698 aaKnown RBP15.62■□□□□ 0.09
LMNA-213ENST00000473598 NOX5Q96PH1 765 aa15.62■□□□□ 0.09
LMNA-213ENST00000473598 PRO3102Q9H379 93 aa15.62■□□□□ 0.09
LMNA-213ENST00000473598 CXXC1Q9P0U4 656 aaPredicted RBP15.62■□□□□ 0.09
LMNA-213ENST00000473598 A8MXQ7 604 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 BUB1O43683 1085 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 B3GAT3O94766 335 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 LSM8O95777 96 aaKnown RBP15.61■□□□□ 0.09
LMNA-213ENST00000473598 GNL1P36915 607 aaPredicted RBP15.61■□□□□ 0.09
LMNA-213ENST00000473598 SGO2Q562F6 1265 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 NAA35Q5VZE5 725 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 PPP1R2P3Q6NXS1 205 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 TLDC1Q6P9B6 456 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 DCLRE1AQ6PJP8 1040 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 NPAS4Q8IUM7 802 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 COLGALT2Q8IYK4 626 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 CPA5Q8WXQ8 436 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 RPGRIP1Q96KN7 1286 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 CASD1Q96PB1 797 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 SNX25Q9H3E2 840 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 BATF3Q9NR55 127 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 KLC4Q9NSK0 619 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 COLQQ9Y215 455 aaPredicted RBP15.61■□□□□ 0.09
LMNA-213ENST00000473598 STXBP5LQ9Y2K9 1186 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 NCANO14594 1321 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 CDH23Q9H251 3354 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 MYO1FO00160 1098 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 B4GALT3O60512 393 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 SNUPNO95149 360 aaKnown RBP15.61■□□□□ 0.09
LMNA-213ENST00000473598 MYBL2P10244 700 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 LMO2P25791 158 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 CDH5P33151 784 aaPredicted RBP15.61■□□□□ 0.09
LMNA-213ENST00000473598 NSFP46459 744 aaKnown RBP15.61■□□□□ 0.09
LMNA-213ENST00000473598 NAP1L1P55209 391 aaKnown RBP15.61■□□□□ 0.09
LMNA-213ENST00000473598 GPC5P78333 572 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 RNASELQ05823 741 aaKnown RBP15.61■□□□□ 0.09
LMNA-213ENST00000473598 CKAP4Q07065 602 aaKnown RBP15.61■□□□□ 0.09
LMNA-213ENST00000473598 CNGA2Q16280 664 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 PDCD2Q16342 344 aaPredicted RBP15.61■□□□□ 0.09
LMNA-213ENST00000473598 TIGD5Q53EQ6 642 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 CEP85LQ5SZL2 805 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 CD300LGQ6UXG3 332 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 DSTYKQ6XUX3 929 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 MAB21L3Q8N8X9 362 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 RFFLQ8WZ73 363 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 ARHGEF26Q96DR7 871 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 ZNF518BQ9C0D4 1074 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 LHX5Q9H2C1 402 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 HOMER3Q9NSC5 361 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 TRIOBPQ9H2D6 2365 aa15.61■□□□□ 0.09
LMNA-213ENST00000473598 GABRDO14764 452 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 ZNF185O15231 689 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 FGBP02675 491 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 EZRP15311 586 aaKnown RBP15.6■□□□□ 0.09
LMNA-213ENST00000473598 GATMP50440 423 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 WSCD1Q658N2 575 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.6■□□□□ 0.096e-6■□□□□ 8.1
LMNA-213ENST00000473598 ACOT1Q86TX2 421 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 MCOLN2Q8IZK6 566 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 CRYBG2Q8N1P7 616 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 TMEM86AQ8N2M4 240 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 TMEM35BQ8NCS4 154 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 BCAS4Q8TDM0 211 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 RSPH1Q8WYR4 309 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 CAPZA3Q96KX2 299 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 FAM193BQ96PV7 902 aaPredicted RBP15.6■□□□□ 0.09
LMNA-213ENST00000473598 HPCAL4Q9UM19 191 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.6■□□□□ 0.09
LMNA-213ENST00000473598 O00370 1275 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 STILQ15468 1287 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 PAN2Q504Q3 1202 aaKnown RBP15.6■□□□□ 0.09
LMNA-213ENST00000473598 PSRC1Q6PGN9 363 aaPredicted RBP15.6■□□□□ 0.09
LMNA-213ENST00000473598 MON1BQ7L1V2 547 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 TMCO2Q7Z6W1 182 aaPredicted RBP15.6■□□□□ 0.09
LMNA-213ENST00000473598 OSTM1Q86WC4 334 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 PHF13Q86YI8 300 aaPredicted RBP15.6■□□□□ 0.09
LMNA-213ENST00000473598 CREG2Q8IUH2 290 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 RHOT2Q8IXI1 618 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 WDTC1Q8N5D0 677 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 C12orf29Q8N999 325 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 SLC35G2Q8TBE7 412 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 DNAI2Q9GZS0 605 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 DPEP3Q9H4B8 488 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 CPSF2Q9P2I0 782 aaKnown RBP15.6■□□□□ 0.09
LMNA-213ENST00000473598 DNAJB4Q9UDY4 337 aa15.6■□□□□ 0.09
LMNA-213ENST00000473598 GTF3C4Q9UKN8 822 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms