RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 VCPIP1Q96JH7 1222 aa4.23□□□□□ -1.73
GINS1-202ENST00000473460 NDRG4Q9ULP0 352 aaKnown RBP4.23□□□□□ -1.73
GINS1-202ENST00000473460 GABRQQ9UN88 632 aa4.23□□□□□ -1.73
GINS1-202ENST00000473460 TCRBV5S1A1TA0A578 114 aa4.22□□□□□ -1.73
GINS1-202ENST00000473460 SLC16A6O15403 523 aa4.22□□□□□ -1.73
GINS1-202ENST00000473460 FGBP02675 491 aa4.22□□□□□ -1.73
GINS1-202ENST00000473460 HDCP19113 662 aa4.22□□□□□ -1.73
GINS1-202ENST00000473460 PDCP20941 246 aa4.22□□□□□ -1.73
GINS1-202ENST00000473460 IL1R2P27930 398 aa4.22□□□□□ -1.73
GINS1-202ENST00000473460 RENBPP51606 427 aa4.22□□□□□ -1.73
GINS1-202ENST00000473460 MAP2K6P52564 334 aa4.22□□□□□ -1.73
GINS1-202ENST00000473460 HTRA4P83105 476 aaPredicted RBP4.22□□□□□ -1.73
GINS1-202ENST00000473460 TRIM71Q2Q1W2 868 aaKnown RBP4.22□□□□□ -1.73
GINS1-202ENST00000473460 MEX3CQ5U5Q3 659 aaKnown RBP4.22□□□□□ -1.73
GINS1-202ENST00000473460 TERB1Q8NA31 727 aa4.22□□□□□ -1.73
GINS1-202ENST00000473460 C16orf52Q8NHV5 167 aa4.22□□□□□ -1.73
GINS1-202ENST00000473460 XAGE5Q8WWM1 108 aa4.22□□□□□ -1.73
GINS1-202ENST00000473460 SNX18Q96RF0 628 aa4.22□□□□□ -1.73
GINS1-202ENST00000473460 PCDHA1Q9Y5I3 950 aa4.22□□□□□ -1.73
GINS1-202ENST00000473460 TNKSO95271 1327 aa4.21□□□□□ -1.73
GINS1-202ENST00000473460 LY6G6EA0A0G2JKS1 128 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 ADAM10O14672 748 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 EXOC3O60645 756 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 FTLP02792 175 aaPredicted RBP4.21□□□□□ -1.74
GINS1-202ENST00000473460 CSF1RP07333 972 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 FPR3P25089 353 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 HOXD9P28356 352 aaPredicted RBP4.21□□□□□ -1.74
GINS1-202ENST00000473460 TPTEP56180 551 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 GPSM2P81274 684 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 ITKQ08881 620 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 GTF2H3Q13889 308 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 IQCB1Q15051 598 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 MIDNQ504T8 468 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 RNASE12Q5GAN4 147 aaKnown RBP4.21□□□□□ -1.74
GINS1-202ENST00000473460 EMC10Q5UCC4 262 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 SHC4Q6S5L8 630 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 LAYNQ6UX15 382 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 MRPL10Q7Z7H8 261 aaKnown RBP4.21□□□□□ -1.74
GINS1-202ENST00000473460 PNMA8AQ86V59 439 aaPredicted RBP4.21□□□□□ -1.74
GINS1-202ENST00000473460 ABHD11Q8NFV4 315 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 SPATA3Q8NHX4 192 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 SOCS4Q8WXH5 440 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 SLC13A1Q9BZW2 595 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 LMBRD1Q9NUN5 540 aa4.21□□□□□ -1.74
GINS1-202ENST00000473460 MYMKA6NI61 221 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 hCG_1984214I3L0E3 225 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 KATNA1O75449 491 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 USP1O94782 785 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 UNC5CO95185 931 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 CHRM5P08912 532 aaPredicted RBP4.2□□□□□ -1.74
GINS1-202ENST00000473460 PRF1P14222 555 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 GUCY2FP51841 1108 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 E2F2Q14209 437 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 RBMS2Q15434 407 aaKnown RBP4.2□□□□□ -1.74
GINS1-202ENST00000473460 TWIST1Q15672 202 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 CYP1B1Q16678 543 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 CERKLQ49MI3 558 aaPredicted RBP4.2□□□□□ -1.74
GINS1-202ENST00000473460 L1TD1Q5T7N2 865 aaKnown RBP4.2□□□□□ -1.74
GINS1-202ENST00000473460 THEMIS2Q5TEJ8 643 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 EGFLAMQ63HQ2 1017 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 MEPCEQ7L2J0 689 aaKnown RBP4.2□□□□□ -1.74
GINS1-202ENST00000473460 PIP4P1Q86T03 277 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 MIER2Q8N344 545 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 PCSK9Q8NBP7 692 aaKnown RBP4.2□□□□□ -1.74
GINS1-202ENST00000473460 MTMR8Q96EF0 704 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 FAM118BQ9BPY3 351 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 PNPOQ9NVS9 261 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 ASIC5Q9NY37 505 aa4.2□□□□□ -1.74
GINS1-202ENST00000473460 MRPS17Q9Y2R5 130 aaKnown RBP4.2□□□□□ -1.74
GINS1-202ENST00000473460 IGKV2D-30A0A075B6S6 120 aa4.19□□□□□ -1.74
GINS1-202ENST00000473460 CLSTN1O94985 981 aa4.19□□□□□ -1.74
GINS1-202ENST00000473460 CDKN1CP49918 316 aaPredicted RBP4.19□□□□□ -1.74
GINS1-202ENST00000473460 ALDH5A1P51649 535 aaPredicted RBP4.19□□□□□ -1.74
GINS1-202ENST00000473460 NKX6-1P78426 367 aaPredicted RBP4.19□□□□□ -1.74
GINS1-202ENST00000473460 PTPN21Q16825 1174 aa4.19□□□□□ -1.74
GINS1-202ENST00000473460 TBC1D25Q3MII6 688 aa4.19□□□□□ -1.74
GINS1-202ENST00000473460 ZIK1Q3SY52 487 aaPredicted RBP4.19□□□□□ -1.74
GINS1-202ENST00000473460 C10orf25Q5T742 122 aa4.19□□□□□ -1.74
GINS1-202ENST00000473460 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
GINS1-202ENST00000473460 ZNF813Q6ZN06 617 aa4.19□□□□□ -1.74
GINS1-202ENST00000473460 NSMCE1Q8WV22 266 aa4.19□□□□□ -1.74
GINS1-202ENST00000473460 EFHD1Q9BUP0 239 aa4.19□□□□□ -1.74
GINS1-202ENST00000473460 CIPCQ9C0C6 399 aa4.19□□□□□ -1.74
GINS1-202ENST00000473460 CCNL1Q9UK58 526 aaPredicted RBP4.19□□□□□ -1.74
GINS1-202ENST00000473460 PRR23D1E9PI22 279 aaPredicted RBP4.18□□□□□ -1.74
GINS1-202ENST00000473460 UBE2Q2LH0YL09 131 aa4.18□□□□□ -1.74
GINS1-202ENST00000473460 PRR23D2P0DMB1 279 aaPredicted RBP4.18□□□□□ -1.74
GINS1-202ENST00000473460 ADORA2AP29274 412 aa4.18□□□□□ -1.74
GINS1-202ENST00000473460 VIPR2P41587 438 aa4.18□□□□□ -1.74
GINS1-202ENST00000473460 SOX8P57073 446 aa4.18□□□□□ -1.74
GINS1-202ENST00000473460 PLS1Q14651 629 aa4.18□□□□□ -1.74
GINS1-202ENST00000473460 LEXMQ3ZCV2 418 aa4.18□□□□□ -1.74
GINS1-202ENST00000473460 DEPDC1Q5TB30 811 aa4.18□□□□□ -1.74
GINS1-202ENST00000473460 MTHFD1LQ6UB35 978 aa4.18□□□□□ -1.74
GINS1-202ENST00000473460 DPY19L3Q6ZPD9 716 aa4.18□□□□□ -1.74
GINS1-202ENST00000473460 USP45Q70EL2 814 aa4.18□□□□□ -1.74
GINS1-202ENST00000473460 ZNF280BQ86YH2 543 aa4.18□□□□□ -1.74
GINS1-202ENST00000473460 CELF5Q8N6W0 485 aaKnown RBP4.18□□□□□ -1.74
GINS1-202ENST00000473460 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.18□□□□□ -1.74
GINS1-202ENST00000473460 ZNF398Q8TD17 642 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms