RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 H0YCG3 227 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 KHNYNO15037 678 aaKnown RBP13.56□□□□□ -0.24
TRAF4-209ENST00000473421 HYAL3O43820 417 aaPredicted RBP13.56□□□□□ -0.24
TRAF4-209ENST00000473421 CKMP06732 381 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 PTGER3P43115 390 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 IFNAR2P48551 515 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 DHPSP49366 369 aaPredicted RBP13.56□□□□□ -0.24
TRAF4-209ENST00000473421 FAM193AP78312 1265 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 SMARCB1Q12824 385 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 INTS6LQ5JSJ4 861 aaKnown RBP13.56□□□□□ -0.24
TRAF4-209ENST00000473421 C12orf40Q86WS4 652 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 TTC30AQ86WT1 665 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 PIGKQ92643 395 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 RAD54LQ92698 747 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 SAAL1Q96ER3 474 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 FGFBP2Q9BYJ0 223 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 RNF38Q9H0F5 515 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 TMEM9BQ9NQ34 198 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 SIX4Q9UIU6 781 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 KLK13Q9UKR3 277 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 AGAP1Q9UPQ3 857 aa13.56□□□□□ -0.24
TRAF4-209ENST00000473421 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.56□□□□□ -0.24
TRAF4-209ENST00000473421 FASNP49327 2511 aaKnown RBP13.56□□□□□ -0.24
TRAF4-209ENST00000473421 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 SPAARA0A1B0GVQ0 90 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 GOLGA8IPA6NC78 632 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 GOLGA8JA6NMD2 632 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 SGK1O00141 431 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 TAF4O00268 1085 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 PPP1R37O75864 691 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 ITGB3P05106 788 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 USP17L7P0C7H9 530 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 CEACAM1P13688 526 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 PAX3P23760 479 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 LMO2P25791 158 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 TFAMQ00059 246 aaKnown RBP13.55□□□□□ -0.24
TRAF4-209ENST00000473421 CRY1Q16526 586 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 SV2CQ496J9 727 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 USP39Q53GS9 565 aaKnown RBP13.55□□□□□ -0.24
TRAF4-209ENST00000473421 RILPL1Q5EBL4 403 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 DAB2IPQ5VWQ8 1189 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 CYP2U1Q7Z449 544 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 SFR1Q86XK3 245 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 SCN4BQ8IWT1 228 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 TMEFF1Q8IYR6 380 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 ALLCQ8N6M5 410 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 OLIG1Q8TAK6 271 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 ATP2A3Q93084 1043 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 TRMT2BQ96GJ1 504 aaKnown RBP13.55□□□□□ -0.24
TRAF4-209ENST00000473421 ZSCAN31Q96LW9 406 aaPredicted RBP13.55□□□□□ -0.24
TRAF4-209ENST00000473421 ACBD6Q9BR61 282 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 FAM213AQ9BRX8 229 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 STRA6Q9BX79 667 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 TBC1D7Q9P0N9 293 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 ZMYM5Q9UJ78 669 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 NME7Q9Y5B8 376 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 ATXN2Q99700 1313 aaKnown RBP13.55□□□□□ -0.24
TRAF4-209ENST00000473421 PI4KAP42356 2102 aa13.55□□□□□ -0.24
TRAF4-209ENST00000473421 HELZP42694 1942 aaKnown RBP13.54□□□□□ -0.24
TRAF4-209ENST00000473421 LOC400499M0QZD8 3231 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 TRAV19A0A0A6YYK7 116 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 SOBPA7XYQ1 873 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 CYP17A1P05093 508 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 HDCP19113 662 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 CSRP1P21291 193 aaKnown RBP13.54□□□□□ -0.24
TRAF4-209ENST00000473421 MAPK8P45983 427 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 CASP5P51878 434 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 PSMC1P62191 440 aaKnown RBP13.54□□□□□ -0.24
TRAF4-209ENST00000473421 AMPD2Q01433 879 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 TSPY1Q01534 308 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 RING1Q06587 406 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 SOWAHAQ2M3V2 549 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 LMBRD2Q68DH5 695 aaPredicted RBP13.54□□□□□ -0.24
TRAF4-209ENST00000473421 DYMQ7RTS9 669 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 ZNF720Q7Z2F6 126 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 DEFB119Q8N690 84 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 IL17RCQ8NAC3 791 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 OR2I1PQ8NGU4 316 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 LEO1Q8WVC0 666 aaPredicted RBP13.54□□□□□ -0.24
TRAF4-209ENST00000473421 POMGNT1Q8WZA1 660 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 ACDQ96AP0 544 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 CNOT6LQ96LI5 555 aaKnown RBP13.54□□□□□ -0.24
TRAF4-209ENST00000473421 TMEM206Q9H813 350 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 TMEM30AQ9NV96 361 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 MMP17Q9ULZ9 603 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 PTPRJQ12913 1337 aa13.54□□□□□ -0.24
TRAF4-209ENST00000473421 MYO18AQ92614 2054 aaKnown RBP13.54□□□□□ -0.24
TRAF4-209ENST00000473421 LEFTY2O00292 366 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 GABRDO14764 452 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 ADAM23O75077 832 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 CD2BP2O95400 341 aaKnown RBP13.53□□□□□ -0.24
TRAF4-209ENST00000473421 KRT18P05783 430 aaKnown RBP13.53□□□□□ -0.24
TRAF4-209ENST00000473421 P2RY2P41231 377 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 CACNA2D1P54289 1103 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 RPL10AP62906 217 aaKnown RBP13.53□□□□□ -0.24
TRAF4-209ENST00000473421 NFE2Q16621 373 aaPredicted RBP13.53□□□□□ -0.24
TRAF4-209ENST00000473421 TRIM61Q5EBN2 209 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 ARL6IP4Q66PJ3 421 aaKnown RBP13.53□□□□□ -0.24
TRAF4-209ENST00000473421 FAM171BQ6P995 826 aa13.53□□□□□ -0.24
TRAF4-209ENST00000473421 FILIP1Q7Z7B0 1213 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms