RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 CSH1P0DML2 217 aa10.34□□□□□ -0.75
MCF2L-223ENST00000473345 CSH2P0DML3 217 aa10.34□□□□□ -0.75
MCF2L-223ENST00000473345 DDX6P26196 483 aaKnown RBP eCLIP10.34□□□□□ -0.75
MCF2L-223ENST00000473345 GBP1P32455 592 aa10.34□□□□□ -0.75
MCF2L-223ENST00000473345 PSMC1P62191 440 aaKnown RBP10.34□□□□□ -0.75
MCF2L-223ENST00000473345 SOWAHAQ2M3V2 549 aa10.34□□□□□ -0.75
MCF2L-223ENST00000473345 LMBRD2Q68DH5 695 aaPredicted RBP10.34□□□□□ -0.75
MCF2L-223ENST00000473345 ARMCX6Q7L4S7 300 aa10.34□□□□□ -0.75
MCF2L-223ENST00000473345 ZNF720Q7Z2F6 126 aa10.34□□□□□ -0.75
MCF2L-223ENST00000473345 LIMS2Q7Z4I7 341 aa10.34□□□□□ -0.75
MCF2L-223ENST00000473345 PHTF2Q8N3S3 785 aa10.34□□□□□ -0.75
MCF2L-223ENST00000473345 FAM184AQ8NB25 1140 aa10.34□□□□□ -0.75
MCF2L-223ENST00000473345 GLIS3Q8NEA6 775 aa10.34□□□□□ -0.75
MCF2L-223ENST00000473345 OR2I1PQ8NGU4 316 aa10.34□□□□□ -0.75
MCF2L-223ENST00000473345 C2orf15Q8WU43 125 aaKnown RBP10.34□□□□□ -0.75
MCF2L-223ENST00000473345 LEO1Q8WVC0 666 aaPredicted RBP10.34□□□□□ -0.75
MCF2L-223ENST00000473345 KBTBD7Q8WVZ9 684 aa10.34□□□□□ -0.75
MCF2L-223ENST00000473345 MRPS31Q92665 395 aaKnown RBP10.34□□□□□ -0.75
MCF2L-223ENST00000473345 TRMT2BQ96GJ1 504 aaKnown RBP10.34□□□□□ -0.75
MCF2L-223ENST00000473345 ZHX3Q9H4I2 956 aa10.34□□□□□ -0.75
MCF2L-223ENST00000473345 DDX43Q9NXZ2 648 aaKnown RBP10.34□□□□□ -0.75
MCF2L-223ENST00000473345 DSEQ9UL01 958 aa10.34□□□□□ -0.75
MCF2L-223ENST00000473345 AGAP1Q9UPQ3 857 aa10.34□□□□□ -0.75
MCF2L-223ENST00000473345 ANAPC1Q9H1A4 1944 aa10.34□□□□□ -0.75
MCF2L-223ENST00000473345 ZFYVE26Q68DK2 2539 aa10.34□□□□□ -0.75
MCF2L-223ENST00000473345 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 RHOBTB1O94844 696 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 CSRP1P21291 193 aaKnown RBP10.33□□□□□ -0.76
MCF2L-223ENST00000473345 TFAMQ00059 246 aaKnown RBP10.33□□□□□ -0.76
MCF2L-223ENST00000473345 RING1Q06587 406 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 ELF2Q15723 593 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 TAF12Q16514 161 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 CRY1Q16526 586 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 KYAT1Q16773 422 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 MAP7D1Q3KQU3 841 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 UAP1L1Q3KQV9 507 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 FBXO43Q4G163 708 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 MCTP1Q6DN14 999 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 FAM171BQ6P995 826 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 PIP4P1Q86T03 277 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 METTL23Q86XA0 190 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 TMEFF1Q8IYR6 380 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 DCP1BQ8IZD4 617 aaKnown RBP10.33□□□□□ -0.76
MCF2L-223ENST00000473345 THEM5Q8N1Q8 247 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 CPA6Q8N4T0 437 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 DEFB119Q8N690 84 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 ALLCQ8N6M5 410 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 IL17RCQ8NAC3 791 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 TSTD1Q8NFU3 115 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 PIGKQ92643 395 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 P2RY11Q96G91 374 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 EPSTI1Q96J88 318 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 CNOT6LQ96LI5 555 aaKnown RBP10.33□□□□□ -0.76
MCF2L-223ENST00000473345 ACBD6Q9BR61 282 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 CBWD1Q9BRT8 395 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 FAM213AQ9BRX8 229 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 TRIM9Q9C026 710 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 ST6GALNAC4Q9H4F1 302 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 CD93Q9NPY3 652 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 TMEM9BQ9NQ34 198 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 TBC1D7Q9P0N9 293 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 MMP17Q9ULZ9 603 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 NUP205Q92621 2012 aa10.33□□□□□ -0.76
MCF2L-223ENST00000473345 MYMKA6NI61 221 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 H0YCG3 227 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 LEFTY2O00292 366 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 TRIM24O15164 1050 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 CKMP06732 381 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 USP17L7P0C7H9 530 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 CEACAM1P13688 526 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 TCF3P15923 654 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 P2RY2P41231 377 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 KIR2DL1P43626 348 aaPredicted RBP10.32□□□□□ -0.76
MCF2L-223ENST00000473345 MAPK8P45983 427 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 IFNAR2P48551 515 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 DHPSP49366 369 aaPredicted RBP10.32□□□□□ -0.76
MCF2L-223ENST00000473345 PGFP49763 221 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 PTPAQ15257 358 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 SV2CQ496J9 727 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 RILPL1Q5EBL4 403 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 ARL6IP4Q66PJ3 421 aaKnown RBP10.32□□□□□ -0.76
MCF2L-223ENST00000473345 CC2D1AQ6P1N0 951 aaPredicted RBP10.32□□□□□ -0.76
MCF2L-223ENST00000473345 RHBDF2Q6PJF5 856 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 DYMQ7RTS9 669 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 CYP2U1Q7Z449 544 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 FILIP1Q7Z7B0 1213 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 MIB1Q86YT6 1006 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 BRSK2Q8IWQ3 736 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 SCN4BQ8IWT1 228 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 TXNDC5Q8NBS9 432 aaKnown RBP10.32□□□□□ -0.76
MCF2L-223ENST00000473345 OR5B17Q8NGF7 314 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 ATP2A3Q93084 1043 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 MYLPFQ96A32 169 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 DNAJC19Q96DA6 116 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 ERLEC1Q96DZ1 483 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 ZSCAN31Q96LW9 406 aaPredicted RBP10.32□□□□□ -0.76
MCF2L-223ENST00000473345 MTMR12Q9C0I1 747 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 TMEM206Q9H813 350 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 PDE11AQ9HCR9 933 aa10.32□□□□□ -0.76
MCF2L-223ENST00000473345 CD248Q9HCU0 757 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms