RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 TROVE2P10155 538 aaKnown RBP eCLIP22.13■■□□□ 1.13
COL18A1-207ENST00000473212 ARL4CP56559 192 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 RAB6CQ53S08 254 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 WASHC2DQ5SRD0 308 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 ADGRD1Q6QNK2 874 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 PPIL6Q8IXY8 311 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 SCYL3Q8IZE3 742 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 FBXO36Q8NEA4 188 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 MIPEPQ99797 713 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 IMPG2Q9BZV3 1241 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 RAB6CQ9H0N0 254 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 SSU72Q9NP77 194 aaKnown RBP22.13■■□□□ 1.13
COL18A1-207ENST00000473212 DDX56Q9NY93 547 aaKnown RBP22.13■■□□□ 1.13
COL18A1-207ENST00000473212 NXF1Q9UBU9 619 aaKnown RBP22.13■■□□□ 1.13
COL18A1-207ENST00000473212 AFG3L2Q9Y4W6 797 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 E7ENQ6 273 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 CST8O60676 142 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 CDH8P55286 799 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 TNFAIP1Q13829 316 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 PIGHQ14442 188 aaPredicted RBP22.13■■□□□ 1.13
COL18A1-207ENST00000473212 BRSK2Q8IWQ3 736 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 ENDOVQ8N8Q3 282 aaKnown RBP22.13■■□□□ 1.13
COL18A1-207ENST00000473212 TEX13BQ9BXU2 312 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 CORO1CQ9ULV4 474 aaPredicted RBP22.13■■□□□ 1.13
COL18A1-207ENST00000473212 SNCAIPQ9Y6H5 919 aa22.13■■□□□ 1.13
COL18A1-207ENST00000473212 MGAMO43451 1857 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 A0A0G2JND7 137 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 LIN7AO14910 233 aaPredicted RBP22.12■■□□□ 1.13
COL18A1-207ENST00000473212 TMEM63AO94886 807 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 GCKP35557 465 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 RFWD3Q6PCD5 774 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 PCGF5Q86SE9 256 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 UNC45BQ8IWX7 931 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 OSBPL1AQ9BXW6 950 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 ADAMTS5Q9UNA0 930 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 LRCH4O75427 683 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 UBA1P22314 1058 aaKnown RBP22.12■■□□□ 1.13
COL18A1-207ENST00000473212 PSMA2P25787 234 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 PTDSS1P48651 473 aaKnown RBP22.12■■□□□ 1.13
COL18A1-207ENST00000473212 CCNHP51946 323 aaPredicted RBP22.12■■□□□ 1.13
COL18A1-207ENST00000473212 DLK2Q6UY11 383 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 EP400NLQ6ZTU2 488 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 THNSL1Q8IYQ7 743 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 NAT8LQ8N9F0 302 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 TMEM35BQ8NCS4 154 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 MZB1Q8WU39 189 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 PTPRN2Q92932 1015 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 ACSS3Q9H6R3 686 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 STK32BQ9NY57 414 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 LNPEPQ9UIQ6 1025 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 GJA3Q9Y6H8 435 aa22.12■■□□□ 1.13
COL18A1-207ENST00000473212 ADCY3O60266 1144 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 MSCO60682 206 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 LDHAP00338 332 aaKnown RBP22.11■■□□□ 1.13
COL18A1-207ENST00000473212 CD19P15391 556 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 ABCD1P33897 745 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 SLC25A11Q02978 314 aaKnown RBP22.11■■□□□ 1.13
COL18A1-207ENST00000473212 BBS9Q3SYG4 887 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 SPDYAQ5MJ70 313 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 PALM2Q8IXS6 379 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 TMEM192Q8IY95 271 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 BANPQ8N9N5 519 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 DHRS4Q9BTZ2 278 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 TLE6Q9H808 572 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 MANSC1Q9H8J5 431 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 SAR1AQ9NR31 198 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 SPDYE16A6NNV3 312 aaPredicted RBP22.11■■□□□ 1.13
COL18A1-207ENST00000473212 PIK3R2O00459 728 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 NDC80O14777 642 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 UPP2O95045 317 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 ATG7O95352 703 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 RPL22P35268 128 aaKnown RBP22.11■■□□□ 1.13
COL18A1-207ENST00000473212 PCK1P35558 622 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 GMPSP49915 693 aaPredicted RBP22.11■■□□□ 1.13
COL18A1-207ENST00000473212 LRRC6Q86X45 466 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 IGDCC3Q8IVU1 814 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 ZNF398Q8TD17 642 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 DCAKDQ8WVC6 231 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 CDHR1Q96JP9 859 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 NIF3L1Q9GZT8 377 aa22.11■■□□□ 1.13
COL18A1-207ENST00000473212 CFAP69A5D8W1 941 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 ASPAP45381 313 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 KLHL38Q2WGJ6 581 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 LRRN4Q8WUT4 740 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 RSAD2Q8WXG1 361 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 CADM1Q9BY67 442 aaKnown RBP22.1■■□□□ 1.13
COL18A1-207ENST00000473212 PICK1Q9NRD5 415 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 HEY2Q9UBP5 337 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 FETUBQ9UGM5 382 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 HMGXB4Q9UGU5 601 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 SIP14410 1827 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 B4GALT5O43286 388 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 LSM8O95777 96 aaKnown RBP22.1■■□□□ 1.13
COL18A1-207ENST00000473212 STXBP2Q15833 593 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 CDCA2Q69YH5 1023 aaPredicted RBP22.1■■□□□ 1.13
COL18A1-207ENST00000473212 ANO7Q6IWH7 933 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP22.1■■□□□ 1.13
COL18A1-207ENST00000473212 TRAPPC12Q8WVT3 735 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 JDP2Q8WYK2 163 aa22.1■■□□□ 1.13
COL18A1-207ENST00000473212 CPXM1Q96SM3 734 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms