RNA–Protein interactions for RNA: ENST00000473073.1

PCCB-211, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,964 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-211ENST00000473073 SF3B1O75533 1304 aaKnown RBP eCLIP13.3□□□□□ -0.282e-6■■■■■ 109.7
PCCB-211ENST00000473073 RIOK3O14730 519 aaKnown RBP13.3□□□□□ -0.28
PCCB-211ENST00000473073 ZNF185O15231 689 aa13.3□□□□□ -0.28
PCCB-211ENST00000473073 TRAPPC3O43617 180 aa13.3□□□□□ -0.28
PCCB-211ENST00000473073 MAP3K7CLP57077 242 aa13.3□□□□□ -0.28
PCCB-211ENST00000473073 AMPD2Q01433 879 aa13.3□□□□□ -0.28
PCCB-211ENST00000473073 RTP2Q5QGT7 225 aa13.3□□□□□ -0.28
PCCB-211ENST00000473073 CLEC20AQ6ZU45 233 aa13.3□□□□□ -0.28
PCCB-211ENST00000473073 FAM183BPQ6ZVS7 135 aa13.3□□□□□ -0.28
PCCB-211ENST00000473073 PEX26Q7Z412 305 aa13.3□□□□□ -0.28
PCCB-211ENST00000473073 SLFN11Q7Z7L1 901 aa13.3□□□□□ -0.28
PCCB-211ENST00000473073 FAM35AQ86V20 835 aa13.3□□□□□ -0.28
PCCB-211ENST00000473073 THEM5Q8N1Q8 247 aa13.3□□□□□ -0.28
PCCB-211ENST00000473073 CLEC4CQ8WTT0 213 aa13.3□□□□□ -0.28
PCCB-211ENST00000473073 KCNK16Q96T55 309 aa13.3□□□□□ -0.28
PCCB-211ENST00000473073 PKMYT1Q99640 499 aa13.3□□□□□ -0.28
PCCB-211ENST00000473073 MIS12Q9H081 205 aa13.3□□□□□ -0.28
PCCB-211ENST00000473073 METTL5Q9NRN9 209 aaKnown RBP13.3□□□□□ -0.28
PCCB-211ENST00000473073 PARVAQ9NVD7 372 aa13.3□□□□□ -0.28
PCCB-211ENST00000473073 EFCAB14O75071 495 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 GRAP2O75791 330 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 AP1G2O75843 785 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 MTA2O94776 668 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 LCP1P13796 627 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 BDNFP23560 247 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 HADHBP55084 474 aaKnown RBP13.29□□□□□ -0.28
PCCB-211ENST00000473073 TCEAL1Q15170 157 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 OR6B2Q6IFH4 312 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 PPP1R2P3Q6NXS1 205 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 KCNT2Q6UVM3 1135 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 NT5DC3Q86UY8 548 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 SCUBE3Q8IX30 993 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 EMC1Q8N766 993 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 C3orf20Q8ND61 904 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 LRRN4CLQ8ND94 238 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 JOSD2Q8TAC2 188 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 IPO4Q8TEX9 1081 aaKnown RBP13.29□□□□□ -0.28
PCCB-211ENST00000473073 DPF3Q92784 378 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 CAPZA3Q96KX2 299 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 SELENOOQ9BVL4 669 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 VN1R3Q9BXE9 311 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 DUSP16Q9BY84 665 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 DNAI2Q9GZS0 605 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 ALG6Q9Y672 507 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 SCINQ9Y6U3 715 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 CHD7Q9P2D1 2997 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 KIAA1671Q9BY89 1806 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 ARHGEF37A1IGU5 675 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 FAM200BP0CF97 657 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 NPR3P17342 541 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 COMTP21964 271 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 PAX3P23760 479 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 GABRB2P47870 512 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 RNASE9P60153 205 aaKnown RBP13.29□□□□□ -0.28
PCCB-211ENST00000473073 TSPY1Q01534 308 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 OGDHQ02218 1023 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 CTXN3Q4LDR2 81 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 SLC39A12Q504Y0 691 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 FAM102AQ5T9C2 384 aaPredicted RBP13.29□□□□□ -0.28
PCCB-211ENST00000473073 PAPD7Q5XG87 772 aaKnown RBP13.29□□□□□ -0.28
PCCB-211ENST00000473073 FAM171BQ6P995 826 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 PRSS55Q6UWB4 352 aaPredicted RBP13.29□□□□□ -0.28
PCCB-211ENST00000473073 PIGZQ86VD9 579 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 MSANTD4Q8NCY6 345 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 FEZF2Q8TBJ5 459 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 COG1Q8WTW3 980 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 NDRG1Q92597 394 aaKnown RBP13.29□□□□□ -0.28
PCCB-211ENST00000473073 ABHD8Q96I13 439 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 PGLYRP2Q96PD5 576 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 SMOQ99835 787 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 MRPL47Q9HD33 250 aaKnown RBP13.29□□□□□ -0.28
PCCB-211ENST00000473073 ABCB6Q9NP58 842 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 EHD2Q9NZN4 543 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 STRIP2Q9ULQ0 834 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 SNX12Q9UMY4 172 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 MRFAP1Q9Y605 127 aa13.29□□□□□ -0.28
PCCB-211ENST00000473073 NLRC5Q86WI3 1866 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 CCDC85CA6NKD9 419 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 SYN3O14994 580 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 OAZ2O95190 189 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 FGFR3P22607 806 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 ARPP19P56211 112 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 PLCB3Q01970 1234 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 ZNF252P-AS1Q0IIN9 211 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 TAF5Q15542 800 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 PPP1R15BQ5SWA1 713 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 C11orf63Q6NUN7 778 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 DCUN1D2Q6PH85 259 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 RSPO2Q6UXX9 243 aaPredicted RBP13.28□□□□□ -0.28
PCCB-211ENST00000473073 GPRIN1Q7Z2K8 1008 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 SYCE1Q8N0S2 351 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 ZMIZ2Q8NF64 920 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 SPATA18Q8TC71 538 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 IGSF21Q96ID5 467 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 HTATIP2Q9BUP3 242 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 SLC4A5Q9BY07 1137 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 SMARCAL1Q9NZC9 954 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 AMFRQ9UKV5 643 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 SAR1BQ9Y6B6 198 aa13.28□□□□□ -0.28
PCCB-211ENST00000473073 TMEM191CA6NGB0 347 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms