RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 VRTNQ9H8Y1 702 aa15.3■□□□□ 0.04
ABCF3-209ENST00000472608 TRPV4Q9HBA0 871 aa15.3■□□□□ 0.04
ABCF3-209ENST00000472608 METTL14Q9HCE5 456 aaKnown RBP15.3■□□□□ 0.04
ABCF3-209ENST00000472608 DACH1Q9UI36 760 aa15.3■□□□□ 0.04
ABCF3-209ENST00000472608 RWDD2AQ9UIY3 292 aa15.3■□□□□ 0.04
ABCF3-209ENST00000472608 PIAS3Q9Y6X2 628 aa15.3■□□□□ 0.04
ABCF3-209ENST00000472608 GREB1Q4ZG55 1949 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 TRIM49BA6NDI0 452 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 CYB561D2O14569 222 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 KCNK5O95279 499 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 FGFR1OPO95684 399 aaKnown RBP15.29■□□□□ 0.04
ABCF3-209ENST00000472608 CST3P01034 146 aaPredicted RBP15.29■□□□□ 0.04
ABCF3-209ENST00000472608 KRT19P08727 400 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 PSMC3P17980 439 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 KCNA4P22459 653 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 YWHAHQ04917 246 aaPredicted RBP15.29■□□□□ 0.04
ABCF3-209ENST00000472608 SF3A2Q15428 464 aaKnown RBP15.29■□□□□ 0.04
ABCF3-209ENST00000472608 ZACNQ401N2 412 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 AASDHQ4L235 1098 aaPredicted RBP15.29■□□□□ 0.04
ABCF3-209ENST00000472608 C1orf220Q5T0J3 134 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 CCDC183Q5T5S1 534 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 ZNF280DQ6N043 979 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 C1orf228Q6PIY5 440 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 VITQ6UXI7 678 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 UNQ6494/PRO21346Q6UXR6 183 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 WDR5BQ86VZ2 330 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 DEPDC1BQ8WUY9 529 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 MSANTD3Q96H12 275 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 TMEM121BQ9BXQ6 578 aaPredicted RBP15.29■□□□□ 0.04
ABCF3-209ENST00000472608 RXFP3Q9NSD7 469 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 WASF3Q9UPY6 502 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 WDFY3Q8IZQ1 3526 aa15.29■□□□□ 0.04
ABCF3-209ENST00000472608 WDR27A2RRH5 827 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 OR6C75A6NL08 312 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 C1QTNF9BB2RNN3 333 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 TULP1O00294 542 aaPredicted RBP15.28■□□□□ 0.04
ABCF3-209ENST00000472608 ZNF197O14709 1029 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 STX10O60499 249 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 ABLIM3O94929 683 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 GNA14O95837 355 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 C1QTNF9P0C862 333 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 ERCC5P28715 1186 aaPredicted RBP15.28■□□□□ 0.04
ABCF3-209ENST00000472608 MARSP56192 900 aaKnown RBP15.28■□□□□ 0.04
ABCF3-209ENST00000472608 DLG4P78352 724 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 PLA2G2CQ5R387 149 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 STPG1Q5TH74 334 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 TDRD10Q5VZ19 366 aaKnown RBP15.28■□□□□ 0.04
ABCF3-209ENST00000472608 OVOS1Q6IE37 1185 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 SV2AQ7L0J3 742 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 LIMS2Q7Z4I7 341 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 METTL23Q86XA0 190 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 TMEM86AQ8N2M4 240 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 TOP6BLQ8N6T0 577 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 SYAP1Q96A49 352 aaPredicted RBP15.28■□□□□ 0.04
ABCF3-209ENST00000472608 HPDLQ96IR7 371 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 ARMCX3Q9UH62 379 aaPredicted RBP15.28■□□□□ 0.04
ABCF3-209ENST00000472608 MAFFQ9ULX9 164 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 CTNND2Q9UQB3 1225 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 CDY1Q9Y6F8 540 aa15.28■□□□□ 0.04
ABCF3-209ENST00000472608 LAMA1P25391 3075 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 HUS1O60921 280 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 PHACTR2O75167 634 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 EPN2O95208 641 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 GDI1P31150 447 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 CCR2P41597 374 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 RAP1GAPP47736 663 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 TRPC3Q13507 836 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 LRRC32Q14392 662 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 CTXN3Q4LDR2 81 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 WDR44Q5JSH3 913 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 TPGS2Q68CL5 300 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 MFSD6LQ8IWD5 586 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 C12orf50Q8NA57 414 aaPredicted RBP15.27■□□□□ 0.04
ABCF3-209ENST00000472608 ZNF461Q8TAF7 563 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 TAF4BQ92750 862 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 SMARCD2Q92925 531 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 TCEAL4Q96EI5 215 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 EEF2KMTQ96G04 330 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 ARRDC1-AS1Q9H2J1 176 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 TMEM8AQ9HCN3 771 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 FBXL5Q9UKA1 691 aa15.27■□□□□ 0.04
ABCF3-209ENST00000472608 PMM2O15305 246 aa15.26■□□□□ 0.03
ABCF3-209ENST00000472608 MOSPD3O75425 235 aa15.26■□□□□ 0.03
ABCF3-209ENST00000472608 BIRC3Q13489 604 aa15.26■□□□□ 0.03
ABCF3-209ENST00000472608 NCOA4Q13772 614 aa15.26■□□□□ 0.03
ABCF3-209ENST00000472608 SGSM1Q2NKQ1 1148 aa15.26■□□□□ 0.03
ABCF3-209ENST00000472608 KLHL40Q2TBA0 621 aa15.26■□□□□ 0.03
ABCF3-209ENST00000472608 DGKKQ5KSL6 1271 aa15.26■□□□□ 0.03
ABCF3-209ENST00000472608 SCARA3Q6AZY7 606 aa15.26■□□□□ 0.03
ABCF3-209ENST00000472608 CEP68Q76N32 757 aa15.26■□□□□ 0.03
ABCF3-209ENST00000472608 TCEAL8Q8IYN2 117 aa15.26■□□□□ 0.03
ABCF3-209ENST00000472608 THEM5Q8N1Q8 247 aa15.26■□□□□ 0.03
ABCF3-209ENST00000472608 FAXDC2Q96IV6 333 aa15.26■□□□□ 0.03
ABCF3-209ENST00000472608 FAM84AQ96KN4 292 aa15.26■□□□□ 0.03
ABCF3-209ENST00000472608 ZSWIM3Q96MP5 696 aa15.26■□□□□ 0.03
ABCF3-209ENST00000472608 SRRTQ9BXP5 876 aaKnown RBP15.26■□□□□ 0.03
ABCF3-209ENST00000472608 XYLT2Q9H1B5 865 aa15.26■□□□□ 0.03
ABCF3-209ENST00000472608 C2orf42Q9NWW7 574 aa15.26■□□□□ 0.03
ABCF3-209ENST00000472608 PCDHGA5Q9Y5G8 931 aa15.26■□□□□ 0.03
ABCF3-209ENST00000472608 TIMM13Q9Y5L4 95 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms