RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ADAMTS9Q9P2N4 1935 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 LAMA5O15230 3695 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 MYO16Q9Y6X6 1858 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 VWA3AA6NCI4 1184 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 K7EQS6 105 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 LAD1O00515 517 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 HNRNPDLO14979 420 aaKnown RBP10.05□□□□□ -0.8
VCL-204ENST00000472585 CYP2F1P24903 491 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 ADSSP30520 456 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 GTF2BQ00403 316 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 BFSP1Q12934 665 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 GNL2Q13823 731 aaKnown RBP10.05□□□□□ -0.8
VCL-204ENST00000472585 DHX8Q14562 1220 aaKnown RBP10.05□□□□□ -0.8
VCL-204ENST00000472585 TMEM132DQ14C87 1099 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 VEPH1Q14D04 833 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 ZNF77Q15935 545 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 EML3Q32P44 896 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 OSTM1Q86WC4 334 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 FRMD1Q8N878 549 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 CCDC26Q8TAB7 109 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 TSPAN18Q96SJ8 248 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 RAB34Q9BZG1 259 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 TPSD1Q9BZJ3 242 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 CCSER1Q9C0I3 900 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 DPP3Q9NY33 737 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 GCNT4Q9P109 453 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 EVLQ9UI08 416 aaPredicted RBP10.05□□□□□ -0.8
VCL-204ENST00000472585 MAGED2Q9UNF1 606 aaPredicted RBP10.05□□□□□ -0.8
VCL-204ENST00000472585 WNT6Q9Y6F9 365 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 STYXL1Q9Y6J8 313 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 SCN1AP35498 2009 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 DENND4CQ5VZ89 1909 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 NAV2Q8IVL1 2488 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 ASXL3Q9C0F0 2248 aa10.05□□□□□ -0.8
VCL-204ENST00000472585 FAM221BA6H8Z2 402 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 C2orf78A6NCI8 922 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 TRAK2O60296 914 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 AVPR1AP37288 418 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 HMGN5P82970 282 aaKnown RBP10.04□□□□□ -0.8
VCL-204ENST00000472585 KCNA1Q09470 495 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 SCAPQ12770 1279 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 MCM6Q14566 821 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 ZNF268Q14587 947 aaPredicted RBP10.04□□□□□ -0.8
VCL-204ENST00000472585 ZNF423Q2M1K9 1284 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 LPCAT2Q7L5N7 544 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 GPBP1Q86WP2 473 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 TTC30AQ86WT1 665 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 CD302Q8IX05 232 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 MYCT1Q8N699 235 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 GLIS3Q8NEA6 775 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 SPPL2BQ8TCT7 592 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 OSCP1Q8WVF1 389 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 HNRNPLLQ8WVV9 542 aaKnown RBP10.04□□□□□ -0.8
VCL-204ENST00000472585 CCDC86Q9H6F5 360 aaKnown RBP10.04□□□□□ -0.8
VCL-204ENST00000472585 KCND2Q9NZV8 630 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 LARSQ9P2J5 1176 aaKnown RBP10.04□□□□□ -0.8
VCL-204ENST00000472585 KCNG1Q9UIX4 513 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 ZMYM5Q9UJ78 669 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 L1RE1Q9UN81 338 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 DERAQ9Y315 318 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 C2CD2Q9Y426 696 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 BPTFQ12830 3046 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 KIAA1549LQ6ZVL6 1849 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 SHROOM3Q8TF72 1996 aa10.04□□□□□ -0.8
VCL-204ENST00000472585 SMG1Q96Q15 3661 aaKnown RBP10.04□□□□□ -0.8
VCL-204ENST00000472585 CEP192Q8TEP8 1941 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 TSC2P49815 1807 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 KPNA7A9QM74 516 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 K7ENM7 598 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 XPOTO43592 962 aaKnown RBP10.03□□□□□ -0.8
VCL-204ENST00000472585 PRPF40AO75400 957 aaKnown RBP10.03□□□□□ -0.8
VCL-204ENST00000472585 NOL4O94818 638 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 APC2O95996 2303 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 ENGP17813 658 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 ACAT1P24752 427 aaKnown RBP10.03□□□□□ -0.8
VCL-204ENST00000472585 OPRD1P41143 372 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 DPP6P42658 865 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 TAF6P49848 677 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 HNRNPDQ14103 355 aaKnown RBP10.03□□□□□ -0.8
VCL-204ENST00000472585 MTF1Q14872 753 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 KYAT1Q16773 422 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 EMC10Q5UCC4 262 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 ANO7Q6IWH7 933 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 PIP4P1Q86T03 277 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 RASSF3Q86WH2 238 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 SYT12Q8IV01 421 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 THEM5Q8N1Q8 247 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 PDCL2Q8N4E4 241 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 CPA6Q8N4T0 437 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 FAM184AQ8NB25 1140 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 USP33Q8TEY7 942 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 C2orf15Q8WU43 125 aaKnown RBP10.03□□□□□ -0.8
VCL-204ENST00000472585 CD101Q93033 1021 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 LRIG1Q96JA1 1093 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 SPACA7Q96KW9 195 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 MYRFLQ96LU7 910 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 GTPBP2Q9BX10 602 aaKnown RBP10.03□□□□□ -0.8
VCL-204ENST00000472585 STRA6Q9BX79 667 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 ASB7Q9H672 318 aa10.03□□□□□ -0.8
VCL-204ENST00000472585 TMEM74BQ9NUR3 256 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms