RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 LPIN3Q9BQK8 851 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 DUSP16Q9BY84 665 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 IGFLR1Q9H665 355 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 DMAP1Q9NPF5 467 aaPredicted RBP17.85■□□□□ 0.45
CCM2-205ENST00000472223 KRT82Q9NSB4 513 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 TMLHEQ9NVH6 421 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 EHD2Q9NZN4 543 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 PCDHGC3Q9UN70 934 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 PCDHGC5Q9Y5F6 944 aa17.85■□□□□ 0.45
CCM2-205ENST00000472223 CLDN5O00501 218 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 MICAL2O94851 1124 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 LRG1P02750 347 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 SETSIPP0DME0 302 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 SKILP12757 684 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 NPR3P17342 541 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 CYP2F1P24903 491 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 CLCN4P51793 760 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 GOLGA8FQ08AF8 430 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 GOLGA8DPQ0D2H9 430 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 ARID5BQ14865 1188 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 DUSP6Q16828 381 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 CYP26C1Q6V0L0 522 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 TMTC1Q8IUR5 882 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 TCEAL8Q8IYN2 117 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 ZNF518BQ9C0D4 1074 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 MIS12Q9H081 205 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 LHX5Q9H2C1 402 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 ACP6Q9NPH0 428 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 SLC27A5Q9Y2P5 690 aa17.84■□□□□ 0.45
CCM2-205ENST00000472223 AKR1B10O60218 316 aa17.83■□□□□ 0.44
CCM2-205ENST00000472223 IPO7O95373 1038 aaKnown RBP17.83■□□□□ 0.44
CCM2-205ENST00000472223 LSM8O95777 96 aaKnown RBP17.83■□□□□ 0.44
CCM2-205ENST00000472223 CALCAP01258 141 aa17.83■□□□□ 0.44
CCM2-205ENST00000472223 MMEP08473 750 aa17.83■□□□□ 0.44
CCM2-205ENST00000472223 SPATA31D3P0C874 917 aa17.83■□□□□ 0.44
CCM2-205ENST00000472223 HAPLN1P10915 354 aaPredicted RBP17.83■□□□□ 0.44
CCM2-205ENST00000472223 POU3F3P20264 500 aaPredicted RBP17.83■□□□□ 0.44
CCM2-205ENST00000472223 EPHB3P54753 998 aa17.83■□□□□ 0.44
CCM2-205ENST00000472223 MAP3K7CLP57077 242 aa17.83■□□□□ 0.44
CCM2-205ENST00000472223 CDK17Q00537 523 aa17.83■□□□□ 0.44
CCM2-205ENST00000472223 PPM1LQ5SGD2 360 aa17.83■□□□□ 0.44
CCM2-205ENST00000472223 SPATA31D4Q6ZUB0 917 aa17.83■□□□□ 0.44
CCM2-205ENST00000472223 DEFB123Q8N688 67 aa17.83■□□□□ 0.44
CCM2-205ENST00000472223 CCDC112Q8NEF3 446 aa17.83■□□□□ 0.44
CCM2-205ENST00000472223 UBA3Q8TBC4 463 aa17.83■□□□□ 0.44
CCM2-205ENST00000472223 CASP10Q92851 521 aa17.83■□□□□ 0.44
CCM2-205ENST00000472223 CEP295NLQ96MC4 621 aa17.83■□□□□ 0.44
CCM2-205ENST00000472223 BAG1Q99933 345 aaPredicted RBP17.83■□□□□ 0.44
CCM2-205ENST00000472223 SYNCQ9H7C4 482 aa17.83■□□□□ 0.44
CCM2-205ENST00000472223 NOCTQ9UK39 431 aaKnown RBP17.83■□□□□ 0.44
CCM2-205ENST00000472223 FBXW11Q9UKB1 542 aa17.83■□□□□ 0.44
CCM2-205ENST00000472223 CHD9Q3L8U1 2897 aa17.83■□□□□ 0.44
CCM2-205ENST00000472223 SSU72P8A0A1W2PR75 194 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 C8AP07357 584 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 SSTR3P32745 418 aaPredicted RBP17.82■□□□□ 0.44
CCM2-205ENST00000472223 CDR1P51861 262 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 TCEAL5Q5H9L2 206 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 LLGL2Q6P1M3 1020 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 LILRA6Q6PI73 481 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 ADGRD2Q7Z7M1 963 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 ITIH5Q86UX2 942 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 PASD1Q8IV76 773 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 MICALL1Q8N3F8 863 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 SLC20A1Q8WUM9 679 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 C8orf48Q96LL4 319 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 UBXN6Q9BZV1 441 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 LRRC4Q9HBW1 653 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 LUC7LQ9NQ29 371 aaKnown RBP17.82■□□□□ 0.44
CCM2-205ENST00000472223 MAN1C1Q9NR34 630 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 ST7Q9NRC1 585 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 DZANK1Q9NVP4 752 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 MTCH2Q9Y6C9 303 aa17.82■□□□□ 0.44
CCM2-205ENST00000472223 MTCL1Q9Y4B5 1905 aaKnown RBP17.82■□□□□ 0.44
CCM2-205ENST00000472223 XPO1O14980 1071 aaKnown RBP17.81■□□□□ 0.44
CCM2-205ENST00000472223 XYLBO75191 536 aa17.81■□□□□ 0.44
CCM2-205ENST00000472223 CYLC1P35663 651 aaPredicted RBP17.81■□□□□ 0.44
CCM2-205ENST00000472223 ACADSBP45954 432 aa17.81■□□□□ 0.44
CCM2-205ENST00000472223 NSFP46459 744 aaKnown RBP17.81■□□□□ 0.44
CCM2-205ENST00000472223 PDE4CQ08493 712 aa17.81■□□□□ 0.44
CCM2-205ENST00000472223 PAQR9Q6ZVX9 377 aa17.81■□□□□ 0.44
CCM2-205ENST00000472223 ZNF571Q7Z3V5 609 aaPredicted RBP17.81■□□□□ 0.44
CCM2-205ENST00000472223 CCDC170Q8IYT3 715 aa17.81■□□□□ 0.44
CCM2-205ENST00000472223 SLC7A14Q8TBB6 771 aa17.81■□□□□ 0.44
CCM2-205ENST00000472223 IPO4Q8TEX9 1081 aaKnown RBP17.81■□□□□ 0.44
CCM2-205ENST00000472223 SLC22A17Q8WUG5 538 aa17.81■□□□□ 0.44
CCM2-205ENST00000472223 DDX1Q92499 740 aaKnown RBP17.81■□□□□ 0.44
CCM2-205ENST00000472223 SECISBP2LQ93073 1101 aaKnown RBP17.81■□□□□ 0.44
CCM2-205ENST00000472223 ZNF512Q96ME7 567 aaPredicted RBP17.81■□□□□ 0.44
CCM2-205ENST00000472223 NHEJ1Q9H9Q4 299 aaPredicted RBP17.81■□□□□ 0.44
CCM2-205ENST00000472223 CSNK1G1Q9HCP0 422 aa17.81■□□□□ 0.44
CCM2-205ENST00000472223 PNPLA8Q9NP80 782 aa17.81■□□□□ 0.44
CCM2-205ENST00000472223 ASB3Q9Y575 518 aa17.81■□□□□ 0.44
CCM2-205ENST00000472223 INSL5Q9Y5Q6 135 aa17.81■□□□□ 0.44
CCM2-205ENST00000472223 HCFC2Q9Y5Z7 792 aa17.81■□□□□ 0.44
CCM2-205ENST00000472223 F8VP50 259 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 RTN3O95197 1032 aaPredicted RBP17.8■□□□□ 0.44
CCM2-205ENST00000472223 SEC24AO95486 1093 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 HNRNPA1P09651 372 aaKnown RBP eCLIP17.8■□□□□ 0.44
CCM2-205ENST00000472223 EPCAMP16422 314 aa17.8■□□□□ 0.44
CCM2-205ENST00000472223 EIF4A3P38919 411 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms