RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 ZNF268Q14587 947 aaPredicted RBP12.31□□□□□ -0.44
COL4A3-205ENST00000471862 KCNB1Q14721 858 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 NFIL3Q16649 462 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 ZACNQ401N2 412 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 TXNDC8Q6A555 127 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 C1orf228Q6PIY5 440 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 TXNDC11Q6PKC3 985 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 MAMSTRQ6ZN01 415 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 SCN4BQ8IWT1 228 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 MAB21L3Q8N8X9 362 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 MYCBPAPQ8TBZ2 947 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 TMC2Q8TDI7 906 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 CSGALNACT1Q8TDX6 532 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 MRPS31Q92665 395 aaKnown RBP12.31□□□□□ -0.44
COL4A3-205ENST00000471862 USP13Q92995 863 aaPredicted RBP12.31□□□□□ -0.44
COL4A3-205ENST00000471862 SYAP1Q96A49 352 aaPredicted RBP12.31□□□□□ -0.44
COL4A3-205ENST00000471862 IER2Q9BTL4 223 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 KIF9Q9HAQ2 790 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 GDPD2Q9HCC8 539 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 TDP1Q9NUW8 608 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 GTSE1Q9NYZ3 720 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 CCL26Q9Y258 94 aa12.31□□□□□ -0.44
COL4A3-205ENST00000471862 SPECC1L-ADORA2AF8WAN1 911 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 ZNF202O95125 648 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 TDGF1P13385 188 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 BDNFP23560 247 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 GNL1P36915 607 aaPredicted RBP12.3□□□□□ -0.44
COL4A3-205ENST00000471862 AVPR1AP37288 418 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 TNNC1P63316 161 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 DLG4P78352 724 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 TNK2Q07912 1038 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 MTAPQ13126 283 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 GAS6Q14393 721 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 MDH1BQ5I0G3 518 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 C1orf220Q5T0J3 134 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 ZC3H14Q6PJT7 736 aaKnown RBP12.3□□□□□ -0.44
COL4A3-205ENST00000471862 RALGPS2Q86X27 583 aaPredicted RBP12.3□□□□□ -0.44
COL4A3-205ENST00000471862 OR6B3Q8NGW1 331 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 FAM83CQ9BQN1 747 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 TTLL2Q9BWV7 592 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 SNX25Q9H3E2 840 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 DPEP3Q9H4B8 488 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 SMYD3Q9H7B4 428 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 LMAN1LQ9HAT1 526 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 HPS4Q9NQG7 708 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 TMEM30AQ9NV96 361 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 GCNT4Q9P109 453 aa12.3□□□□□ -0.44
COL4A3-205ENST00000471862 EP300Q09472 2414 aaPredicted RBP12.29□□□□□ -0.44
COL4A3-205ENST00000471862 MAPK13O15264 365 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 CALUO43852 315 aaPredicted RBP12.29□□□□□ -0.44
COL4A3-205ENST00000471862 PHACTR2O75167 634 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 KIF20AO95235 890 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 LMNAP02545 664 aaKnown RBP12.29□□□□□ -0.44
COL4A3-205ENST00000471862 TCF3P15923 654 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 PTPN1P18031 435 aaKnown RBP12.29□□□□□ -0.44
COL4A3-205ENST00000471862 KPNA1P52294 538 aaPredicted RBP12.29□□□□□ -0.44
COL4A3-205ENST00000471862 CACNA2D1P54289 1103 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 MCCD1P59942 119 aaPredicted RBP12.29□□□□□ -0.44
COL4A3-205ENST00000471862 CYP27A1Q02318 531 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 CSTF1Q05048 431 aaKnown RBP12.29□□□□□ -0.44
COL4A3-205ENST00000471862 USP4Q13107 963 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 BIRC3Q13489 604 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 NCOA4Q13772 614 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 ZNF699Q32M78 642 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 ZCWPW2Q504Y3 356 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 GUF1Q8N442 669 aaKnown RBP12.29□□□□□ -0.44
COL4A3-205ENST00000471862 ZBTB44Q8NCP5 570 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 B3GALNT2Q8NCR0 500 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 CHFRQ96EP1 664 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 C8orf48Q96LL4 319 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 SLC22A12Q96S37 553 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 SDCBP2Q9H190 292 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 GKN1Q9NS71 199 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 THG1LQ9NWX6 298 aaKnown RBP12.29□□□□□ -0.44
COL4A3-205ENST00000471862 NXF1Q9UBU9 619 aaKnown RBP12.29□□□□□ -0.44
COL4A3-205ENST00000471862 GPR179Q6PRD1 2367 aa12.29□□□□□ -0.44
COL4A3-205ENST00000471862 A8MXQ7 604 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 F8VP50 259 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 IKBKBO14920 756 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 TRIM66O15016 1216 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 LILRB5O75023 590 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 AKAP3O75969 853 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 GRIK1P39086 918 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 CDH8P55286 799 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 USP46P62068 366 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 NOP14P78316 857 aaKnown RBP12.28□□□□□ -0.44
COL4A3-205ENST00000471862 FAM160A1Q05DH4 1040 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 ENPEPQ07075 957 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 ZNF77Q15935 545 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 ITPRIPL2Q3MIP1 535 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 ZNF667Q5HYK9 610 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 CEP135Q66GS9 1140 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 DENND5BQ6ZUT9 1274 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 PAQR9Q6ZVX9 377 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 SV2AQ7L0J3 742 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 FMR1NBQ8N0W7 255 aaPredicted RBP12.28□□□□□ -0.44
COL4A3-205ENST00000471862 ADSSL1Q8N142 457 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 SUMF1Q8NBK3 374 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 TTC8Q8TAM2 541 aa12.28□□□□□ -0.44
COL4A3-205ENST00000471862 CCDC47Q96A33 483 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms