RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 PLCB2Q00722 1185 aa20.14■□□□□ 0.81
COMMD1-207ENST00000471704 BECN1Q14457 450 aa20.14■□□□□ 0.81
COMMD1-207ENST00000471704 TAF12Q16514 161 aa20.14■□□□□ 0.81
COMMD1-207ENST00000471704 DDR2Q16832 855 aa20.14■□□□□ 0.81
COMMD1-207ENST00000471704 CFAP221Q4G0U5 840 aa20.14■□□□□ 0.81
COMMD1-207ENST00000471704 CELF5Q8N6W0 485 aaKnown RBP20.14■□□□□ 0.81
COMMD1-207ENST00000471704 ELMO3Q96BJ8 720 aa20.14■□□□□ 0.81
COMMD1-207ENST00000471704 GCNAQ96QF7 691 aa20.14■□□□□ 0.81
COMMD1-207ENST00000471704 SYT15Q9BQS2 421 aa20.14■□□□□ 0.81
COMMD1-207ENST00000471704 VNN1O95497 513 aa20.13■□□□□ 0.81
COMMD1-207ENST00000471704 STAU1O95793 577 aaKnown RBP20.13■□□□□ 0.81
COMMD1-207ENST00000471704 C4BPAP04003 597 aaKnown RBP20.13■□□□□ 0.81
COMMD1-207ENST00000471704 NR3C1P04150 777 aa20.13■□□□□ 0.81
COMMD1-207ENST00000471704 DDX6P26196 483 aaKnown RBP eCLIP20.13■□□□□ 0.81
COMMD1-207ENST00000471704 PCSK1P29120 753 aa20.13■□□□□ 0.81
COMMD1-207ENST00000471704 NRLP54845 237 aa20.13■□□□□ 0.81
COMMD1-207ENST00000471704 TNK2Q07912 1038 aa20.13■□□□□ 0.81
COMMD1-207ENST00000471704 C1orf220Q5T0J3 134 aa20.13■□□□□ 0.81
COMMD1-207ENST00000471704 FMR1NBQ8N0W7 255 aaPredicted RBP20.13■□□□□ 0.81
COMMD1-207ENST00000471704 SPEM1Q8N4L4 309 aa20.13■□□□□ 0.81
COMMD1-207ENST00000471704 MYLPFQ96A32 169 aa20.13■□□□□ 0.81
COMMD1-207ENST00000471704 RMDN1Q96DB5 314 aa20.13■□□□□ 0.81
COMMD1-207ENST00000471704 MMS19Q96T76 1030 aa20.13■□□□□ 0.81
COMMD1-207ENST00000471704 HINFPQ9BQA5 517 aa20.13■□□□□ 0.81
COMMD1-207ENST00000471704 FAM83CQ9BQN1 747 aa20.13■□□□□ 0.81
COMMD1-207ENST00000471704 SMG9Q9H0W8 520 aaKnown RBP20.13■□□□□ 0.81
COMMD1-207ENST00000471704 CDH9Q9ULB4 789 aa20.13■□□□□ 0.81
COMMD1-207ENST00000471704 MAPK8IP1Q9UQF2 711 aa20.13■□□□□ 0.81
COMMD1-207ENST00000471704 TRAF3IP3Q9Y228 551 aa20.13■□□□□ 0.81
COMMD1-207ENST00000471704 R3HCC1Q9Y3T6 440 aaKnown RBP20.13■□□□□ 0.81
COMMD1-207ENST00000471704 NOL4O94818 638 aa20.12■□□□□ 0.81
COMMD1-207ENST00000471704 PDGFRBP09619 1106 aa20.12■□□□□ 0.81
COMMD1-207ENST00000471704 CSH1P0DML2 217 aa20.12■□□□□ 0.81
COMMD1-207ENST00000471704 CSH2P0DML3 217 aa20.12■□□□□ 0.81
COMMD1-207ENST00000471704 CXCL12P48061 93 aa20.12■□□□□ 0.81
COMMD1-207ENST00000471704 SATB1Q01826 763 aa20.12■□□□□ 0.81
COMMD1-207ENST00000471704 LRRC32Q14392 662 aa20.12■□□□□ 0.81
COMMD1-207ENST00000471704 PPP2R5DQ14738 602 aa20.12■□□□□ 0.81
COMMD1-207ENST00000471704 DGKKQ5KSL6 1271 aa20.12■□□□□ 0.81
COMMD1-207ENST00000471704 MON1AQ86VX9 555 aa20.12■□□□□ 0.81
COMMD1-207ENST00000471704 MAB21L3Q8N8X9 362 aa20.12■□□□□ 0.81
COMMD1-207ENST00000471704 TTC8Q8TAM2 541 aa20.12■□□□□ 0.81
COMMD1-207ENST00000471704 USP13Q92995 863 aaPredicted RBP20.12■□□□□ 0.81
COMMD1-207ENST00000471704 FUBP3Q96I24 572 aaKnown RBP eCLIP20.12■□□□□ 0.81
COMMD1-207ENST00000471704 MYRFLQ96LU7 910 aa20.12■□□□□ 0.81
COMMD1-207ENST00000471704 DPEP3Q9H4B8 488 aa20.12■□□□□ 0.81
COMMD1-207ENST00000471704 RBM12Q9NTZ6 932 aaKnown RBP20.12■□□□□ 0.81
COMMD1-207ENST00000471704 THG1LQ9NWX6 298 aaKnown RBP20.12■□□□□ 0.81
COMMD1-207ENST00000471704 SMG5Q9UPR3 1016 aaKnown RBP20.12■□□□□ 0.81
COMMD1-207ENST00000471704 CCL26Q9Y258 94 aa20.12■□□□□ 0.81
COMMD1-207ENST00000471704 TACC1O75410 805 aa20.11■□□□□ 0.81
COMMD1-207ENST00000471704 PAPSS2O95340 614 aaPredicted RBP20.11■□□□□ 0.81
COMMD1-207ENST00000471704 RPL10AP62906 217 aaKnown RBP20.11■□□□□ 0.81
COMMD1-207ENST00000471704 CCINQ13939 588 aa20.11■□□□□ 0.81
COMMD1-207ENST00000471704 KCNB1Q14721 858 aa20.11■□□□□ 0.81
COMMD1-207ENST00000471704 ITPRIPL2Q3MIP1 535 aa20.11■□□□□ 0.81
COMMD1-207ENST00000471704 WDR72Q3MJ13 1102 aa20.11■□□□□ 0.81
COMMD1-207ENST00000471704 TXNDC8Q6A555 127 aa20.11■□□□□ 0.81
COMMD1-207ENST00000471704 SPATA2LQ8IUW3 424 aaPredicted RBP20.11■□□□□ 0.81
COMMD1-207ENST00000471704 ENGASEQ8NFI3 743 aa20.11■□□□□ 0.81
COMMD1-207ENST00000471704 TRMT2BQ96GJ1 504 aaKnown RBP20.11■□□□□ 0.81
COMMD1-207ENST00000471704 VRTNQ9H8Y1 702 aa20.11■□□□□ 0.81
COMMD1-207ENST00000471704 GKN1Q9NS71 199 aa20.11■□□□□ 0.81
COMMD1-207ENST00000471704 MAGED2Q9UNF1 606 aaPredicted RBP20.11■□□□□ 0.81
COMMD1-207ENST00000471704 TGM1P22735 817 aa20.1■□□□□ 0.81
COMMD1-207ENST00000471704 TNNC1P63316 161 aa20.1■□□□□ 0.81
COMMD1-207ENST00000471704 ZNF268Q14587 947 aaPredicted RBP20.1■□□□□ 0.81
COMMD1-207ENST00000471704 NFIL3Q16649 462 aa20.1■□□□□ 0.81
COMMD1-207ENST00000471704 Q6ZS52 159 aa20.1■□□□□ 0.81
COMMD1-207ENST00000471704 SMYD4Q8IYR2 804 aaPredicted RBP20.1■□□□□ 0.81
COMMD1-207ENST00000471704 SYNPOQ8N3V7 929 aa20.1■□□□□ 0.81
COMMD1-207ENST00000471704 RIN3Q8TB24 985 aa20.1■□□□□ 0.81
COMMD1-207ENST00000471704 CHFRQ96EP1 664 aa20.1■□□□□ 0.81
COMMD1-207ENST00000471704 PCED1BQ96HM7 432 aa20.1■□□□□ 0.81
COMMD1-207ENST00000471704 SMYD3Q9H7B4 428 aa20.1■□□□□ 0.81
COMMD1-207ENST00000471704 HPS4Q9NQG7 708 aa20.1■□□□□ 0.81
COMMD1-207ENST00000471704 TDP1Q9NUW8 608 aa20.1■□□□□ 0.81
COMMD1-207ENST00000471704 TMEM30AQ9NV96 361 aa20.1■□□□□ 0.81
COMMD1-207ENST00000471704 NCDNQ9UBB6 729 aa20.1■□□□□ 0.81
COMMD1-207ENST00000471704 NXF1Q9UBU9 619 aaKnown RBP20.1■□□□□ 0.81
COMMD1-207ENST00000471704 OTOL1A6NHN0 477 aaPredicted RBP20.09■□□□□ 0.81
COMMD1-207ENST00000471704 K7ESF4 209 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 BDNFP23560 247 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 ATICP31939 592 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 GNL1P36915 607 aaPredicted RBP20.09■□□□□ 0.81
COMMD1-207ENST00000471704 AVPR1AP37288 418 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 MAGEA11P43364 429 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 RAP1GAPP47736 663 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 CACNA2D1P54289 1103 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 CDH8P55286 799 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 NUCB2P80303 420 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 TRPC3Q13507 836 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 PNOCQ13519 176 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 PON2Q15165 354 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 ZCWPW2Q504Y3 356 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 MDH1BQ5I0G3 518 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 CEP135Q66GS9 1140 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 GUF1Q8N442 669 aaKnown RBP20.09■□□□□ 0.81
COMMD1-207ENST00000471704 OR6B3Q8NGW1 331 aa20.09■□□□□ 0.81
COMMD1-207ENST00000471704 MYCBPAPQ8TBZ2 947 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms