RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 SLC9A1P19634 815 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 ANXA13P27216 316 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 RAD23BP54727 409 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 GCNT1Q02742 428 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 KRT31Q15323 416 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 EXOC3L4Q17RC7 722 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 PHLDB3Q6NSJ2 640 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 TRIM65Q6PJ69 517 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 PLCD3Q8N3E9 789 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 SLC4A11Q8NBS3 891 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 SHKBP1Q8TBC3 707 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 BPIFA3Q9BQP9 254 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 DNAI2Q9GZS0 605 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 EPS15L1Q9UBC2 864 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 LIMD1Q9UGP4 676 aa18.83■□□□□ 0.6
VPS72-204ENST00000471423 MAGED2Q9UNF1 606 aaPredicted RBP18.83■□□□□ 0.6
VPS72-204ENST00000471423 BDP1A6H8Y1 2624 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 A0A1W2PRU2 124 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 SLC38A8A6NNN8 435 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 TNFRSF10AO00220 468 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 MOSPD3O75425 235 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 AP1G2O75843 785 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 CSH1P0DML2 217 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 CSH2P0DML3 217 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 LAMP2P13473 410 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 HMGA1P17096 107 aaKnown RBP18.82■□□□□ 0.6
VPS72-204ENST00000471423 GABRR2P28476 465 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 ADORA2BP29275 332 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 ZNF165P49910 485 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 APBA1Q02410 837 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 GJB7Q6PEY0 223 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 GAREM2Q75VX8 874 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 DHX40Q8IX18 779 aaKnown RBP18.82■□□□□ 0.6
VPS72-204ENST00000471423 SMARCD1Q96GM5 515 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 TMEM176AQ96HP8 235 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 SPATA17Q96L03 361 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 C8orf48Q96LL4 319 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 HSD3B7Q9H2F3 369 aa18.82■□□□□ 0.6
VPS72-204ENST00000471423 NOL4O94818 638 aa18.81■□□□□ 0.6
VPS72-204ENST00000471423 ASGR2P07307 311 aa18.81■□□□□ 0.6
VPS72-204ENST00000471423 ZNF18P17022 549 aa18.81■□□□□ 0.6
VPS72-204ENST00000471423 ACO1P21399 889 aaKnown RBP18.81■□□□□ 0.6
VPS72-204ENST00000471423 PON1P27169 355 aa18.81■□□□□ 0.6
VPS72-204ENST00000471423 TEAD2Q15562 447 aa18.81■□□□□ 0.6
VPS72-204ENST00000471423 POTEHQ6S545 545 aa18.81■□□□□ 0.6
VPS72-204ENST00000471423 TMEM270Q6UE05 265 aa18.81■□□□□ 0.6
VPS72-204ENST00000471423 ST13P5Q8NFI4 369 aaPredicted RBP18.81■□□□□ 0.6
VPS72-204ENST00000471423 KHSRPQ92945 711 aaKnown RBP eCLIP18.81■□□□□ 0.6
VPS72-204ENST00000471423 MCRS1Q96EZ8 462 aa18.81■□□□□ 0.6
VPS72-204ENST00000471423 CYFIP2Q96F07 1278 aa18.81■□□□□ 0.6
VPS72-204ENST00000471423 HEXIM2Q96MH2 286 aaKnown RBP18.81■□□□□ 0.6
VPS72-204ENST00000471423 KREMEN1Q96MU8 473 aa18.81■□□□□ 0.6
VPS72-204ENST00000471423 KCNK16Q96T55 309 aa18.81■□□□□ 0.6
VPS72-204ENST00000471423 HNRNPABQ99729 332 aaKnown RBP18.81■□□□□ 0.6
VPS72-204ENST00000471423 VPS16Q9H269 839 aa18.81■□□□□ 0.6
VPS72-204ENST00000471423 IL21Q9HBE4 155 aa18.81■□□□□ 0.6
VPS72-204ENST00000471423 UBE2TQ9NPD8 197 aaPredicted RBP18.81■□□□□ 0.6
VPS72-204ENST00000471423 DMAP1Q9NPF5 467 aaPredicted RBP18.81■□□□□ 0.6
VPS72-204ENST00000471423 APEX2Q9UBZ4 518 aa18.81■□□□□ 0.6
VPS72-204ENST00000471423 MUTYHQ9UIF7 546 aa18.81■□□□□ 0.6
VPS72-204ENST00000471423 PCDHB4Q9Y5E5 795 aa18.81■□□□□ 0.6
VPS72-204ENST00000471423 ZFP37Q9Y6Q3 630 aaPredicted RBP18.81■□□□□ 0.6
VPS72-204ENST00000471423 DLL1O00548 723 aa18.8■□□□□ 0.6
VPS72-204ENST00000471423 MICAL2O94851 1124 aa18.8■□□□□ 0.6
VPS72-204ENST00000471423 FGF19O95750 216 aa18.8■□□□□ 0.6
VPS72-204ENST00000471423 TPM2P07951 284 aa18.8■□□□□ 0.6
VPS72-204ENST00000471423 FAM200BP0CF97 657 aa18.8■□□□□ 0.6
VPS72-204ENST00000471423 CYP4F8P98187 520 aa18.8■□□□□ 0.6
VPS72-204ENST00000471423 STXBP5Q5T5C0 1151 aa18.8■□□□□ 0.6
VPS72-204ENST00000471423 PPP1R26Q5T8A7 1209 aaPredicted RBP18.8■□□□□ 0.6
VPS72-204ENST00000471423 ANKRD20A12PQ8NF67 263 aa18.8■□□□□ 0.6
VPS72-204ENST00000471423 TRMT2BQ96GJ1 504 aaKnown RBP18.8■□□□□ 0.6
VPS72-204ENST00000471423 CEP295NLQ96MC4 621 aa18.8■□□□□ 0.6
VPS72-204ENST00000471423 GCNAQ96QF7 691 aa18.8■□□□□ 0.6
VPS72-204ENST00000471423 SMOQ99835 787 aa18.8■□□□□ 0.6
VPS72-204ENST00000471423 ATXN3LQ9H3M9 355 aa18.8■□□□□ 0.6
VPS72-204ENST00000471423 GDE1Q9NZC3 331 aa18.8■□□□□ 0.6
VPS72-204ENST00000471423 CUL9Q8IWT3 2517 aa18.8■□□□□ 0.6
VPS72-204ENST00000471423 BEST1O76090 585 aa18.79■□□□□ 0.6
VPS72-204ENST00000471423 ATP1A3P13637 1013 aa18.79■□□□□ 0.6
VPS72-204ENST00000471423 CDK11BP21127 795 aaKnown RBP18.79■□□□□ 0.6
VPS72-204ENST00000471423 CDC25CP30307 473 aa18.79■□□□□ 0.6
VPS72-204ENST00000471423 COPB1P53618 953 aaKnown RBP18.79■□□□□ 0.6
VPS72-204ENST00000471423 MAP3K7CLP57077 242 aa18.79■□□□□ 0.6
VPS72-204ENST00000471423 USP46P62068 366 aa18.79■□□□□ 0.6
VPS72-204ENST00000471423 DENND5BQ6ZUT9 1274 aa18.79■□□□□ 0.6
VPS72-204ENST00000471423 RBBP8NLQ8NC74 664 aaPredicted RBP18.79■□□□□ 0.6
VPS72-204ENST00000471423 ZMIZ2Q8NF64 920 aa18.79■□□□□ 0.6
VPS72-204ENST00000471423 RSAD2Q8WXG1 361 aa18.79■□□□□ 0.6
VPS72-204ENST00000471423 SLITRK6Q9H5Y7 841 aa18.79■□□□□ 0.6
VPS72-204ENST00000471423 KCNK12Q9HB15 430 aa18.79■□□□□ 0.6
VPS72-204ENST00000471423 SIX2Q9NPC8 291 aa18.79■□□□□ 0.6
VPS72-204ENST00000471423 UXTQ9UBK9 157 aaPredicted RBP18.79■□□□□ 0.6
VPS72-204ENST00000471423 LIMA1Q9UHB6 759 aaKnown RBP18.79■□□□□ 0.6
VPS72-204ENST00000471423 GREB1Q4ZG55 1949 aa18.78■□□□□ 0.6
VPS72-204ENST00000471423 SMTNL1A8MU46 457 aa18.78■□□□□ 0.6
VPS72-204ENST00000471423 TADA3O75528 432 aa18.78■□□□□ 0.6
VPS72-204ENST00000471423 CD19P15391 556 aa18.78■□□□□ 0.6
VPS72-204ENST00000471423 MFAP3P55082 362 aa18.78■□□□□ 0.6
VPS72-204ENST00000471423 KCNMA1Q12791 1236 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms