RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 ARP10275 920 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 AARSP49588 968 aaKnown RBP eCLIP7.6□□□□□ -1.19
SMC5-202ENST00000471372 DLG4P78352 724 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 SLFN5Q08AF3 891 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 SLC45A4Q5BKX6 768 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 ATPAF1Q5TC12 328 aaPredicted RBP7.6□□□□□ -1.19
SMC5-202ENST00000471372 MANEALQ5VSG8 457 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 ZNF280DQ6N043 979 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 C4orf50Q6ZRC1 276 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 C1orf131Q8NDD1 294 aaKnown RBP7.6□□□□□ -1.19
SMC5-202ENST00000471372 OR6Y1Q8NGX8 325 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 HVCN1Q96D96 273 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 ERP27Q96DN0 273 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 MED15Q96RN5 788 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 TWSG1Q9GZX9 223 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 SLC25A32Q9H2D1 315 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 IRAK4Q9NWZ3 460 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 POLG2Q9UHN1 485 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 CDY1Q9Y6F8 540 aa7.6□□□□□ -1.19
SMC5-202ENST00000471372 KAT6BQ8WYB5 2073 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 POLRMTO00411 1230 aaKnown RBP7.59□□□□□ -1.19
SMC5-202ENST00000471372 TRIM13O60858 407 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 GFPT2O94808 682 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 RASAL1O95294 804 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 AKT1P31749 480 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 LILRA4P59901 499 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 KRT17Q04695 432 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 AGAP9Q5VTM2 703 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 SLC30A10Q6XR72 485 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 DSTYKQ6XUX3 929 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 MED25Q71SY5 747 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 SIAH1Q8IUQ4 282 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 CFAP52Q8N1V2 620 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 NSUN7Q8NE18 718 aaKnown RBP7.59□□□□□ -1.19
SMC5-202ENST00000471372 ZFP28Q8NHY6 868 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 UCMAQ8WVF2 138 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 BORCS6Q96GS4 357 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 MOGAT1Q96PD6 335 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 TWNKQ96RR1 684 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 CHCHD6Q9BRQ6 235 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 SLC46A2Q9BY10 475 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 FAM83DQ9H4H8 585 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 JMJD4Q9H9V9 463 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 VSX1Q9NZR4 365 aaPredicted RBP7.59□□□□□ -1.19
SMC5-202ENST00000471372 CDYLQ9Y232 598 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 CARMIL2Q6F5E8 1435 aa7.59□□□□□ -1.19
SMC5-202ENST00000471372 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 A0A1B0GTL3 188 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 A0A1W2PRX2 142 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 J3KTA2 159 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 EXOC5O00471 708 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 KRT38O76015 456 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 FCER1AP12319 257 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 ZNF134P52741 427 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 CHRNDQ07001 517 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 GRM4Q14833 912 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 MGAT5BQ3V5L5 792 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 RINT1Q6NUQ1 792 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 SPOCD1Q6ZMY3 1216 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 GPRIN1Q7Z2K8 1008 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 ZFPM1Q8IX07 1006 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 FAM9BQ8IZU0 186 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 SHCBP1Q8NEM2 672 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 CEP70Q8NHQ1 597 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 BPIFB1Q8TDL5 484 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 CENPIQ92674 756 aaPredicted RBP7.58□□□□□ -1.2
SMC5-202ENST00000471372 GRAMD1AQ96CP6 724 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 NEIL1Q96FI4 390 aaPredicted RBP7.58□□□□□ -1.2
SMC5-202ENST00000471372 PHACTR3Q96KR7 559 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 SIGLEC10Q96LC7 697 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 ZNF512Q96ME7 567 aaPredicted RBP7.58□□□□□ -1.2
SMC5-202ENST00000471372 AGXT2Q9BYV1 514 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 VPS16Q9H269 839 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 PLEKHA5Q9HAU0 1116 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 SPON1Q9HCB6 807 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 HELLSQ9NRZ9 838 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 AASSQ9UDR5 926 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 IRAK3Q9Y616 596 aa7.58□□□□□ -1.2
SMC5-202ENST00000471372 OR2W5A6NFC9 320 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 DDX58O95786 925 aaKnown RBP7.57□□□□□ -1.2
SMC5-202ENST00000471372 VIPP01282 170 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 ZSCAN22P10073 491 aaPredicted RBP7.57□□□□□ -1.2
SMC5-202ENST00000471372 SLC5A2P31639 672 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 VAMP2P63027 116 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 GPS1Q13098 491 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 SSPNQ14714 243 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 PTCHD3Q3KNS1 767 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 DOK3Q7L591 496 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 GPR135Q8IZ08 494 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 NRSN1Q8IZ57 195 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 TCP11L2Q8N4U5 519 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 PSD4Q8NDX1 1056 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 RSC1A1Q92681 617 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 GOLGA1Q92805 767 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 C3orf49Q96BT1 292 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 SDCCAG3Q96C92 435 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 LRIG1Q96JA1 1093 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 FAM227BQ96M60 508 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 CENPOQ9BU64 300 aa7.57□□□□□ -1.2
SMC5-202ENST00000471372 ELAC1Q9H777 363 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms