RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 DUSP22Q9NRW4 184 aa6.22□□□□□ -1.41
PRPF40A-206ENST00000471167 WNT6Q9Y6F9 365 aa6.22□□□□□ -1.41
PRPF40A-206ENST00000471167 INO80B-WBP1J3KQ70 363 aa6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 ORC4O43929 436 aa6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 VNN1O95497 513 aa6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 FAM163BP0C2L3 166 aa6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 EN2P19622 333 aaPredicted RBP6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 CYP2C18P33260 490 aa6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 DGKEP52429 567 aa6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 WNT3P56703 355 aa6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 PROSER3Q2NL68 480 aa6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 PTCHD3Q3KNS1 767 aa6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 NXNQ6DKJ4 435 aa6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 CYB5RLQ6IPT4 315 aa6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 ZDHHC24Q6UX98 284 aa6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 TCEAL8Q8IYN2 117 aa6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 CHPFQ8IZ52 775 aa6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 MAGEB6Q8N7X4 407 aa6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 HASPINQ8TF76 798 aa6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 INO80BQ9C086 356 aaPredicted RBP6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 PADI4Q9UM07 663 aa6.21□□□□□ -1.42
PRPF40A-206ENST00000471167 A0A1W2PPL8 197 aa6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 DNAJC9-AS1A6NH13 148 aa6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 TISP43B9A030 160 aa6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 PHGDHO43175 533 aaKnown RBP6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 TLR5O60602 858 aa6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 CELA2AP08217 269 aa6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 CYP4F2P78329 520 aa6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 GPSM2P81274 684 aa6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 PLAC9Q5JTB6 97 aa6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 LAYNQ6UX15 382 aa6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 ZNF66Q6ZN08 573 aa6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 SEMA6DQ8NFY4 1073 aa6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 OR56A3Q8NH54 315 aa6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 R3HDM4Q96D70 268 aa6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 PSMD1Q99460 953 aa6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 THAP7Q9BT49 309 aaPredicted RBP6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 CPNE7Q9UBL6 633 aa6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 SHOC2Q9UQ13 582 aa6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 SNX14Q9Y5W7 946 aa6.2□□□□□ -1.42
PRPF40A-206ENST00000471167 NXPH3O95157 252 aa6.19□□□□□ -1.42
PRPF40A-206ENST00000471167 PRKCGP05129 697 aa6.19□□□□□ -1.42
PRPF40A-206ENST00000471167 CTGFP29279 349 aa6.19□□□□□ -1.42
PRPF40A-206ENST00000471167 E2F2Q14209 437 aa6.19□□□□□ -1.42
PRPF40A-206ENST00000471167 CNN3Q15417 329 aaKnown RBP6.19□□□□□ -1.42
PRPF40A-206ENST00000471167 CYP1B1Q16678 543 aa6.19□□□□□ -1.42
PRPF40A-206ENST00000471167 TMEM119Q4V9L6 283 aa6.19□□□□□ -1.42
PRPF40A-206ENST00000471167 PLA1AQ53H76 456 aa6.19□□□□□ -1.42
PRPF40A-206ENST00000471167 DCAF12L1Q5VU92 463 aa6.19□□□□□ -1.42
PRPF40A-206ENST00000471167 ANKRD16Q6P6B7 361 aa6.19□□□□□ -1.42
PRPF40A-206ENST00000471167 RAPGEF4Q8WZA2 1011 aa6.19□□□□□ -1.42
PRPF40A-206ENST00000471167 TSR2Q969E8 191 aaKnown RBP6.19□□□□□ -1.42
PRPF40A-206ENST00000471167 LENG8Q96PV6 779 aaPredicted RBP6.19□□□□□ -1.42
PRPF40A-206ENST00000471167 FSD1LQ9BXM9 530 aa6.19□□□□□ -1.42
PRPF40A-206ENST00000471167 GABRQQ9UN88 632 aa6.19□□□□□ -1.42
PRPF40A-206ENST00000471167 SH2B3Q9UQQ2 575 aa6.19□□□□□ -1.42
PRPF40A-206ENST00000471167 LINC01548A6NM66 108 aa6.18□□□□□ -1.42
PRPF40A-206ENST00000471167 TSPAN6O43657 245 aa6.18□□□□□ -1.42
PRPF40A-206ENST00000471167 ENGP17813 658 aa6.18□□□□□ -1.42
PRPF40A-206ENST00000471167 SRSF4Q08170 494 aaKnown RBP6.18□□□□□ -1.42
PRPF40A-206ENST00000471167 SLC13A2Q13183 592 aa6.18□□□□□ -1.42
PRPF40A-206ENST00000471167 PPP2R5AQ15172 486 aa6.18□□□□□ -1.42
PRPF40A-206ENST00000471167 AARS2Q5JTZ9 985 aaKnown RBP6.18□□□□□ -1.42
PRPF40A-206ENST00000471167 DEPDC1Q5TB30 811 aa6.18□□□□□ -1.42
PRPF40A-206ENST00000471167 ZNF783Q6ZMS7 281 aa6.18□□□□□ -1.42
PRPF40A-206ENST00000471167 ANKRD13AQ8IZ07 590 aa6.18□□□□□ -1.42
PRPF40A-206ENST00000471167 ABRAQ8N0Z2 381 aa6.18□□□□□ -1.42
PRPF40A-206ENST00000471167 TMEM171Q8WVE6 324 aa6.18□□□□□ -1.42
PRPF40A-206ENST00000471167 SOCS4Q8WXH5 440 aa6.18□□□□□ -1.42
PRPF40A-206ENST00000471167 JDP2Q8WYK2 163 aa6.18□□□□□ -1.42
PRPF40A-206ENST00000471167 MS4A7Q9GZW8 240 aaPredicted RBP6.18□□□□□ -1.42
PRPF40A-206ENST00000471167 BCCIPQ9P287 314 aaKnown RBP eCLIP6.18□□□□□ -1.42
PRPF40A-206ENST00000471167 G3BP2Q9UN86 482 aaKnown RBP6.18□□□□□ -1.42
PRPF40A-206ENST00000471167 TJP3O95049 919 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 CYP2C9P11712 490 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 NDUFB7P17568 137 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 LRPAP1P30533 357 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 SLC7A1P30825 629 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 ALDH9A1P49189 494 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 SUMO3P55854 103 aaPredicted RBP6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 EEFSECP57772 596 aaKnown RBP6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 SSBP2P81877 361 aaPredicted RBP6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 GRM3Q14832 879 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 FAM153CQ494X1 144 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 LMBRD2Q68DH5 695 aaPredicted RBP6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 DPY19L3Q6ZPD9 716 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 Q6ZWC4 215 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 KCTD20Q7Z5Y7 419 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 OR6B3Q8NGW1 331 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 BPIFB1Q8TDL5 484 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 TBC1D5Q92609 795 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 MOGAT1Q96PD6 335 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 BHMT2Q9H2M3 363 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 GLOD4Q9HC38 313 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 GBA2Q9HCG7 927 aaPredicted RBP6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 CNNM1Q9NRU3 951 aa6.17□□□□□ -1.42
PRPF40A-206ENST00000471167 CAPN8A6NHC0 703 aa6.16□□□□□ -1.42
PRPF40A-206ENST00000471167 ONECUT2O95948 504 aa6.16□□□□□ -1.42
PRPF40A-206ENST00000471167 S100BP04271 92 aaPredicted RBP6.16□□□□□ -1.42
PRPF40A-206ENST00000471167 ABCG1P45844 678 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms