RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 FMN1Q68DA7 1419 aa6.33□□□□□ -1.4
RBM39-227ENST00000470563 GAGE12BA1L429 117 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 GAGE12HA6NDE8 117 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 GRXCR1A8MXD5 290 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 NTSR2O95665 410 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 NDST3O95803 873 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 HLA-DOAP06340 250 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 MST1P26927 711 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 GCLCP48506 637 aaPredicted RBP6.32□□□□□ -1.4
RBM39-227ENST00000470563 HHEXQ03014 270 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 GRM1Q13255 1194 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 BOP1Q14137 746 aaKnown RBP6.32□□□□□ -1.4
RBM39-227ENST00000470563 TRIM60Q495X7 471 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 SPTY2D1Q68D10 685 aaPredicted RBP6.32□□□□□ -1.4
RBM39-227ENST00000470563 MMS22LQ6ZRQ5 1243 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 Q6ZSN1 163 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 TRIM63Q969Q1 353 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 FAM89AQ96GI7 184 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 MNTQ99583 582 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 PAGR1Q9BTK6 254 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 AURKAIP1Q9NWT8 199 aaPredicted RBP6.32□□□□□ -1.4
RBM39-227ENST00000470563 HERC5Q9UII4 1024 aaKnown RBP6.32□□□□□ -1.4
RBM39-227ENST00000470563 HDAC9Q9UKV0 1011 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 ATP11BQ9Y2G3 1177 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 RAD54BQ9Y620 910 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 DUSP10Q9Y6W6 482 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 ADAMTS20P59510 1910 aa6.32□□□□□ -1.4
RBM39-227ENST00000470563 DNMBPQ6XZF7 1577 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 A0A1B0GTW7 788 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 MYADML2A6NDP7 307 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 NPEPPSL1A6NEC2 478 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.31□□□□□ -1.4
RBM39-227ENST00000470563 NCAM2O15394 837 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 GPR42O15529 346 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 FOXS1O43638 330 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 SUN1O94901 812 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 SPATA31D3P0C874 917 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 KCNA3P22001 575 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 ITGA8P53708 1063 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 NHLH2Q02577 135 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 ATP1A4Q13733 1029 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 MAPRE1Q15691 268 aaKnown RBP6.31□□□□□ -1.4
RBM39-227ENST00000470563 FBXO47Q5MNV8 452 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 FAXCQ5TGI0 409 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 TAF2Q6P1X5 1199 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 LVRNQ6Q4G3 990 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 RINLQ6ZS11 566 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 LRRC55Q6ZSA7 311 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 SPATA31D4Q6ZUB0 917 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 CIR1Q86X95 450 aaPredicted RBP6.31□□□□□ -1.4
RBM39-227ENST00000470563 CCDC28AQ8IWP9 274 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 COLGALT2Q8IYK4 626 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 OR56A1Q8NGH5 318 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 USP13Q92995 863 aaPredicted RBP6.31□□□□□ -1.4
RBM39-227ENST00000470563 LRRC46Q96FV0 321 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 MARS2Q96GW9 593 aaKnown RBP6.31□□□□□ -1.4
RBM39-227ENST00000470563 TMEM176AQ96HP8 235 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 BOD1Q96IK1 185 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 LRIG1Q96JA1 1093 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 NUDT22Q9BRQ3 303 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 KRTAP9-2Q9BYQ4 174 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 MRPS18AQ9NVS2 196 aaKnown RBP6.31□□□□□ -1.4
RBM39-227ENST00000470563 HSFX1Q9UBD0 423 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 CNOT11Q9UKZ1 510 aaKnown RBP6.31□□□□□ -1.4
RBM39-227ENST00000470563 FGD6Q6ZV73 1430 aa6.31□□□□□ -1.4
RBM39-227ENST00000470563 LRRIQ1Q96JM4 1722 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 PRAMEF33A0A0G2JMD5 474 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 DHHO43323 396 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 PRAMEF10O60809 474 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 ITGA2BP08514 1039 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 COMTP21964 271 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 CST5P28325 142 aaPredicted RBP6.3□□□□□ -1.4
RBM39-227ENST00000470563 PTDSS1P48651 473 aaKnown RBP6.3□□□□□ -1.4
RBM39-227ENST00000470563 MAN2A2P49641 1150 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 TIAL1Q01085 375 aaKnown RBP eCLIP6.3□□□□□ -1.42e-7■□□□□ 10.8
RBM39-227ENST00000470563 TMTC4Q5T4D3 741 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 INTS11Q5TA45 600 aaKnown RBP6.3□□□□□ -1.4
RBM39-227ENST00000470563 LIN54Q6MZP7 749 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 CLNKQ7Z7G1 428 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 GSPT2Q8IYD1 628 aaKnown RBP6.3□□□□□ -1.4
RBM39-227ENST00000470563 LRRC56Q8IYG6 542 aaPredicted RBP6.3□□□□□ -1.4
RBM39-227ENST00000470563 ATG16L2Q8NAA4 619 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 ZNF483Q8TF39 744 aaPredicted RBP6.3□□□□□ -1.4
RBM39-227ENST00000470563 GNRHR2Q96P88 292 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.3□□□□□ -1.46e-18■□□□□ 9.4
RBM39-227ENST00000470563 PCDHAC1Q9H158 963 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 TRIM36Q9NQ86 728 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 RXFP3Q9NSD7 469 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 C9orf78Q9NZ63 289 aaPredicted RBP6.3□□□□□ -1.4
RBM39-227ENST00000470563 VSX1Q9NZR4 365 aaPredicted RBP6.3□□□□□ -1.4
RBM39-227ENST00000470563 VPS51Q9UID3 782 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 ZMYND8Q9ULU4 1186 aaPredicted RBP6.3□□□□□ -1.4
RBM39-227ENST00000470563 JAG2Q9Y219 1238 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 CDYLQ9Y232 598 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 TONSLQ96HA7 1378 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 ABCA10Q8WWZ4 1543 aa6.3□□□□□ -1.4
RBM39-227ENST00000470563 DBX1A6NMT0 343 aa6.29□□□□□ -1.4
RBM39-227ENST00000470563 CD3EAPO15446 510 aaKnown RBP6.29□□□□□ -1.4
RBM39-227ENST00000470563 ERN1O75460 977 aaKnown RBP6.29□□□□□ -1.4
RBM39-227ENST00000470563 WDHD1O75717 1129 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms