RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 CBWD3Q5JTY5 395 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 CBWD5Q5RIA9 395 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 GPR158Q5T848 1215 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 TCERG1LQ5VWI1 586 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 VITQ6UXI7 678 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 PAQR9Q6ZVX9 377 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 ARID3BQ8IVW6 561 aaPredicted RBP15.06■□□□□ 0
TOP3B-215ENST00000470338 MFSD6LQ8IWD5 586 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 STKLD1Q8NE28 680 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 C8orf48Q96LL4 319 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 GCNAQ96QF7 691 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 SLC46A2Q9BY10 475 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 ELOVL4Q9GZR5 314 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 NIF3L1Q9GZT8 377 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 KCNH6Q9H252 994 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 MFSD1Q9H3U5 465 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 CLSTN2Q9H4D0 955 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 TMEM30AQ9NV96 361 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 RAB20Q9NX57 234 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 CA14Q9ULX7 337 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 MAGED2Q9UNF1 606 aaPredicted RBP15.06■□□□□ 0
TOP3B-215ENST00000470338 CTNND2Q9UQB3 1225 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 COL4A2P08572 1712 aa15.06■□□□□ 0
TOP3B-215ENST00000470338 KIF26AQ9ULI4 1882 aaPredicted RBP15.06■□□□□ 0
TOP3B-215ENST00000470338 TRIM66O15016 1216 aa15.05■□□□□ -0
TOP3B-215ENST00000470338 PSMC3P17980 439 aa15.05■□□□□ -0
TOP3B-215ENST00000470338 DDX6P26196 483 aaKnown RBP eCLIP15.05■□□□□ -0
TOP3B-215ENST00000470338 CACNA2D1P54289 1103 aa15.05■□□□□ -0
TOP3B-215ENST00000470338 VCPP55072 806 aaKnown RBP15.05■□□□□ -0
TOP3B-215ENST00000470338 PFKPQ01813 784 aa15.05■□□□□ -0
TOP3B-215ENST00000470338 PAK1Q13153 545 aa15.05■□□□□ -0
TOP3B-215ENST00000470338 DCAF17Q5H9S7 520 aaPredicted RBP15.05■□□□□ -0
TOP3B-215ENST00000470338 IER5LQ5T953 404 aa15.05■□□□□ -0
TOP3B-215ENST00000470338 ASTLQ6HA08 431 aaPredicted RBP15.05■□□□□ -0
TOP3B-215ENST00000470338 PHLDB3Q6NSJ2 640 aa15.05■□□□□ -0
TOP3B-215ENST00000470338 ACOT1Q86TX2 421 aa15.05■□□□□ -0
TOP3B-215ENST00000470338 CCDC150Q8NCX0 1101 aa15.05■□□□□ -0
TOP3B-215ENST00000470338 DEPDC1BQ8WUY9 529 aa15.05■□□□□ -0
TOP3B-215ENST00000470338 RSPRY1Q96DX4 576 aa15.05■□□□□ -0
TOP3B-215ENST00000470338 TRMT61BQ9BVS5 477 aaKnown RBP15.05■□□□□ -0
TOP3B-215ENST00000470338 ZNF518BQ9C0D4 1074 aa15.05■□□□□ -0
TOP3B-215ENST00000470338 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.05■□□□□ -08e-7■■■■■ 212.4
TOP3B-215ENST00000470338 ARHGEF3Q9NR81 526 aa15.05■□□□□ -0
TOP3B-215ENST00000470338 OBP2AQ9NY56 170 aa15.05■□□□□ -0
TOP3B-215ENST00000470338 HMGXB4Q9UGU5 601 aa15.05■□□□□ -0
TOP3B-215ENST00000470338 NCANO14594 1321 aa15.05■□□□□ -0
TOP3B-215ENST00000470338 MIA3Q5JRA6 1907 aa15.05■□□□□ -0
TOP3B-215ENST00000470338 MUC6Q6W4X9 2439 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 HELZP42694 1942 aaKnown RBP15.04■□□□□ -0
TOP3B-215ENST00000470338 PATJQ8NI35 1801 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 HEPACAM2A8MVW5 462 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 F8VP50 259 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 CLDN5O00501 218 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 PMM2O15305 246 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 TADA3O75528 432 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 ANXA13P27216 316 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 MARSP56192 900 aaKnown RBP15.04■□□□□ -0
TOP3B-215ENST00000470338 STX17P56962 302 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 STARD6P59095 220 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 GRM2Q14416 872 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 SLC44A4Q53GD3 710 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 CWF19L1Q69YN2 538 aaKnown RBP15.04■□□□□ -0
TOP3B-215ENST00000470338 DENND5BQ6ZUT9 1274 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 MON1AQ86VX9 555 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 CMTM8Q8IZV2 173 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 FUKQ8N0W3 1084 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 WHAMMQ8TF30 809 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 TTLL2Q9BWV7 592 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 FAM124BQ9H5Z6 455 aaPredicted RBP15.04■□□□□ -0
TOP3B-215ENST00000470338 TRPV5Q9NQA5 729 aa15.04■□□□□ -0
TOP3B-215ENST00000470338 ATP8B3O60423 1300 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 CILPO75339 1184 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 PRAMEF12O95522 483 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 GNA14O95837 355 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 AOC1P19801 751 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 FMO5P49326 533 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 NUBP1P53384 320 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 USP46P62068 366 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 PRKCQQ04759 706 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 FCHO2Q0JRZ9 810 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 CCDC40Q4G0X9 1142 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 WDR44Q5JSH3 913 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 TXNDC8Q6A555 127 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 FAM35AQ86V20 835 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 GPIHBP1Q8IV16 184 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 TTC39CQ8N584 583 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 TMEM105Q8N8V8 129 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 MAB21L3Q8N8X9 362 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 MLKLQ8NB16 471 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 FLCNQ8NFG4 579 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 MRPS31Q92665 395 aaKnown RBP15.03■□□□□ -0
TOP3B-215ENST00000470338 DNASE1L2Q92874 299 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 IRF7Q92985 503 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 TATDN2Q93075 761 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 SHDQ96IW2 340 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 LRRC3BQ96PB8 259 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 GBP4Q96PP9 640 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 MED15Q96RN5 788 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 TWNKQ96RR1 684 aa15.03■□□□□ -0
TOP3B-215ENST00000470338 DDX23Q9BUQ8 820 aaKnown RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms