RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 STK25O00506 426 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 P4HA1P13674 534 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 CD44P16070 742 aaKnown RBP13.4□□□□□ -0.26
ABCF1-204ENST00000468958 BMP6P22004 513 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 ATICP31939 592 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 PTPN5P54829 565 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 CETN1Q12798 172 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 SMARCB1Q12824 385 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 BIRC3Q13489 604 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 MLF2Q15773 248 aaPredicted RBP13.4□□□□□ -0.26
ABCF1-204ENST00000468958 NFE2Q16621 373 aaPredicted RBP13.4□□□□□ -0.26
ABCF1-204ENST00000468958 WDR72Q3MJ13 1102 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 GPR158Q5T848 1215 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 PHLDB3Q6NSJ2 640 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 TTI2Q6NXR4 508 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 FRMD5Q7Z6J6 570 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 ITIH5Q86UX2 942 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 ARID3BQ8IVW6 561 aaPredicted RBP13.4□□□□□ -0.26
ABCF1-204ENST00000468958 CCDC105Q8IYK2 499 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 EEF2KMTQ96G04 330 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 PCED1BQ96HM7 432 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 MMS19Q96T76 1030 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 SLC46A2Q9BY10 475 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 IMPG2Q9BZV3 1241 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 SMYD3Q9H7B4 428 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 VRTNQ9H8Y1 702 aa13.4□□□□□ -0.26
ABCF1-204ENST00000468958 MAGEC2Q9UBF1 373 aaPredicted RBP13.4□□□□□ -0.26
ABCF1-204ENST00000468958 NXF1Q9UBU9 619 aaKnown RBP13.4□□□□□ -0.26
ABCF1-204ENST00000468958 TRIM49BA6NDI0 452 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 SLC38A8A6NNN8 435 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 TACC1O75410 805 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 NOL4O94818 638 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 CLSTN1O94985 981 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 TRIM49P0CI25 452 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 TRIM49CP0CI26 452 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 PSMC3P17980 439 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 PCSK1P29120 753 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 GDI1P31150 447 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 PMS1P54277 932 aaKnown RBP13.39□□□□□ -0.27
ABCF1-204ENST00000468958 PPP3CAQ08209 521 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 FZD5Q13467 585 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 DPCR1Q3MIW9 517 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 ZACNQ401N2 412 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 CFAP221Q4G0U5 840 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 SPOPLQ6IQ16 392 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 SV2AQ7L0J3 742 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 ALYREFQ86V81 257 aaKnown RBP13.39□□□□□ -0.27
ABCF1-204ENST00000468958 MFSD6LQ8IWD5 586 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 ZNF687Q8N1G0 1237 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 DTWD2Q8NBA8 298 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 PJA1Q8NG27 643 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 DNAI2Q9GZS0 605 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 SLITRK6Q9H5Y7 841 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 ABCB6Q9NP58 842 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.39□□□□□ -0.27
ABCF1-204ENST00000468958 TMEM63CQ9P1W3 806 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 CDH9Q9ULB4 789 aa13.39□□□□□ -0.27
ABCF1-204ENST00000468958 MAGED2Q9UNF1 606 aaPredicted RBP13.39□□□□□ -0.27
ABCF1-204ENST00000468958 CLDN5O00501 218 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 CAVIN2O95810 425 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 TPM2P07951 284 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 TRIM21P19474 475 aaKnown RBP13.38□□□□□ -0.27
ABCF1-204ENST00000468958 BDNFP23560 247 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 TARSP26639 723 aaKnown RBP13.38□□□□□ -0.27
ABCF1-204ENST00000468958 STX17P56962 302 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 USP46P62068 366 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 FCHO2Q0JRZ9 810 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 NCOA4Q13772 614 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 VEPH1Q14D04 833 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 DCAF17Q5H9S7 520 aaPredicted RBP13.38□□□□□ -0.27
ABCF1-204ENST00000468958 MDH1BQ5I0G3 518 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 WDR44Q5JSH3 913 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 TCERG1LQ5VWI1 586 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 SCARA5Q6ZMJ2 495 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 TPRG1Q6ZUI0 275 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 SPATA2LQ8IUW3 424 aaPredicted RBP13.38□□□□□ -0.27
ABCF1-204ENST00000468958 SCN4BQ8IWT1 228 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 ANKRD20A12PQ8NF67 263 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 OR6B3Q8NGW1 331 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 MYCBPAPQ8TBZ2 947 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 TAF4BQ92750 862 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 FUBP3Q96I24 572 aaKnown RBP eCLIP13.38□□□□□ -0.27
ABCF1-204ENST00000468958 ZFYVE19Q96K21 471 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 SLC22A12Q96S37 553 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 TRMT61BQ9BVS5 477 aaKnown RBP13.38□□□□□ -0.27
ABCF1-204ENST00000468958 GPR88Q9GZN0 384 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 THAP9Q9H5L6 903 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 TASP1Q9H6P5 420 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 TMEM8AQ9HCN3 771 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 LTB4R2Q9NPC1 389 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 HMGXB4Q9UGU5 601 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 CCL26Q9Y258 94 aa13.38□□□□□ -0.27
ABCF1-204ENST00000468958 KANSL1LA0AUZ9 987 aa13.37□□□□□ -0.27
ABCF1-204ENST00000468958 HLA-DRAP01903 254 aa13.37□□□□□ -0.27
ABCF1-204ENST00000468958 PTPN1P18031 435 aaKnown RBP13.37□□□□□ -0.27
ABCF1-204ENST00000468958 GNL1P36915 607 aaPredicted RBP13.37□□□□□ -0.27
ABCF1-204ENST00000468958 PIK3CAP42336 1068 aa13.37□□□□□ -0.27
ABCF1-204ENST00000468958 MAGEA11P43364 429 aa13.37□□□□□ -0.27
ABCF1-204ENST00000468958 SOX9P48436 509 aa13.37□□□□□ -0.27
ABCF1-204ENST00000468958 MXI1P50539 228 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms