RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 METTL3Q86U44 580 aaKnown RBP9.65□□□□□ -0.87
LCA5-203ENST00000467898 IFNLR1Q8IU57 520 aaPredicted RBP9.65□□□□□ -0.87
LCA5-203ENST00000467898 CERKQ8TCT0 537 aa9.65□□□□□ -0.87
LCA5-203ENST00000467898 BCL7CQ8WUZ0 217 aaPredicted RBP9.65□□□□□ -0.87
LCA5-203ENST00000467898 TRUB1Q8WWH5 349 aaKnown RBP9.65□□□□□ -0.87
LCA5-203ENST00000467898 TAMM41Q96BW9 452 aa9.65□□□□□ -0.87
LCA5-203ENST00000467898 WASH6PQ9NQA3 447 aa9.65□□□□□ -0.87
LCA5-203ENST00000467898 VPS45Q9NRW7 570 aa9.65□□□□□ -0.87
LCA5-203ENST00000467898 KCTD5Q9NXV2 234 aa9.65□□□□□ -0.87
LCA5-203ENST00000467898 SMARCAL1Q9NZC9 954 aa9.65□□□□□ -0.87
LCA5-203ENST00000467898 ASIC3Q9UHC3 531 aa9.65□□□□□ -0.87
LCA5-203ENST00000467898 ATP11BQ9Y2G3 1177 aa9.65□□□□□ -0.87
LCA5-203ENST00000467898 WASF2Q9Y6W5 498 aa9.65□□□□□ -0.87
LCA5-203ENST00000467898 DUSP10Q9Y6W6 482 aa9.65□□□□□ -0.87
LCA5-203ENST00000467898 B4E1Z4 1266 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 GMNNO75496 209 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 KRT5P13647 590 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 PSMA3P25788 255 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 PRDX6P30041 224 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 TRIM23P36406 574 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 STX1BP61266 288 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 CTDSPL2Q05D32 466 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 LONRF1Q17RB8 773 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 ACTRT1Q8TDG2 376 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 SECISBP2Q96T21 854 aaKnown RBP9.64□□□□□ -0.87
LCA5-203ENST00000467898 PITPNM3Q9BZ71 974 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 NT5C3AQ9H0P0 336 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 NEUROG2Q9H2A3 272 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 LY9Q9HBG7 655 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 SYTL2Q9HCH5 934 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 SEPT11Q9NVA2 429 aaKnown RBP9.64□□□□□ -0.87
LCA5-203ENST00000467898 TFR2Q9UP52 801 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 DUOX1Q9NRD9 1551 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 BAZ2AQ9UIF9 1905 aaKnown RBP9.64□□□□□ -0.87
LCA5-203ENST00000467898 FAM196BA6NMK8 535 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 LGALS16A8MUM7 142 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 POTECB2RU33 542 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 EXOC3O60645 756 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 C8BP07358 591 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 INHBBP09529 407 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 FAM228BP0C875 321 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 CDC25AP30304 524 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 MAN1A1P33908 653 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 UBXN1Q04323 297 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 PRKCQQ04759 706 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 SF3A3Q12874 501 aaKnown RBP eCLIP9.64□□□□□ -0.87
LCA5-203ENST00000467898 TRADDQ15628 312 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 HP1BP3Q5SSJ5 553 aaPredicted RBP9.64□□□□□ -0.87
LCA5-203ENST00000467898 SLC51AQ86UW1 340 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 GALNT13Q8IUC8 556 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 SEPT12Q8IYM1 358 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 CCDC24Q8N4L8 307 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 MB21D1Q8N884 522 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 APPL2Q8NEU8 664 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 TTLQ8NG68 377 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 ZNF486Q96H40 463 aaPredicted RBP9.64□□□□□ -0.87
LCA5-203ENST00000467898 FERD3LQ96RJ6 166 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 TTYH3Q9C0H2 523 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 PAIP1Q9H074 479 aaKnown RBP9.64□□□□□ -0.87
LCA5-203ENST00000467898 KLHL25Q9H0H3 589 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 KCNN2Q9H2S1 579 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 LIN7BQ9HAP6 207 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 ANGEL1Q9UNK9 670 aaKnown RBP9.64□□□□□ -0.87
LCA5-203ENST00000467898 PCDHGA8Q9Y5G5 932 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 CCDC88AQ3V6T2 1871 aa9.64□□□□□ -0.87
LCA5-203ENST00000467898 MYH4Q9Y623 1939 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 H7C0C1 242 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 INO80B-WBP1J3KQ70 363 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 MUSKO15146 869 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 SHOXO15266 292 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 GYG2O15488 501 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 SPAG7O75391 227 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 COL6A1P12109 1028 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 EEF2P13639 858 aaKnown RBP9.63□□□□□ -0.87
LCA5-203ENST00000467898 ZNF23P17027 643 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 KRT20P35900 424 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 PSMC2P35998 433 aaKnown RBP9.63□□□□□ -0.87
LCA5-203ENST00000467898 HSD17B2P37059 387 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 RPS8P62241 208 aaKnown RBP9.63□□□□□ -0.87
LCA5-203ENST00000467898 GFPT1Q06210 699 aaPredicted RBP9.63□□□□□ -0.87
LCA5-203ENST00000467898 THOC5Q13769 683 aaKnown RBP9.63□□□□□ -0.87
LCA5-203ENST00000467898 OXA1LQ15070 435 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 PPP2R5EQ16537 467 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 TRIM16LQ309B1 348 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 IGSF11Q5DX21 431 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 NANOGP8Q6NSW7 305 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 ZNF449Q6P9G9 518 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 SGMS1Q86VZ5 419 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 LRRC6Q86X45 466 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 ZNF579Q8NAF0 562 aaKnown RBP9.63□□□□□ -0.87
LCA5-203ENST00000467898 FAM172AQ8WUF8 416 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 MS4A14Q96JA4 679 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 CEP170P1Q96L14 293 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 MROQ9BYG7 248 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 FAM217BQ9NTX9 383 aaPredicted RBP9.63□□□□□ -0.87
LCA5-203ENST00000467898 EMC3Q9P0I2 261 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 RWDD2AQ9UIY3 292 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 ZFP69BQ9UJL9 534 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 C2CD2LO14523 706 aa9.63□□□□□ -0.87
LCA5-203ENST00000467898 ZW10O43264 779 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms