RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 MAPKAPK3Q16644 382 aa5.99□□□□□ -1.45
GAPVD1-211ENST00000467707 ZNF750Q32MQ0 723 aa5.99□□□□□ -1.45
GAPVD1-211ENST00000467707 RBM20Q5T481 1227 aaKnown RBP5.99□□□□□ -1.45
GAPVD1-211ENST00000467707 RRAGBQ5VZM2 374 aa5.99□□□□□ -1.45
GAPVD1-211ENST00000467707 C1orf210Q8IVY1 113 aa5.99□□□□□ -1.45
GAPVD1-211ENST00000467707 SLC15A3Q8IY34 581 aa5.99□□□□□ -1.45
GAPVD1-211ENST00000467707 FAM109AQ8N4B1 249 aa5.99□□□□□ -1.45
GAPVD1-211ENST00000467707 SLC25A43Q8WUT9 341 aaPredicted RBP5.99□□□□□ -1.45
GAPVD1-211ENST00000467707 RNF31Q96EP0 1072 aa5.99□□□□□ -1.45
GAPVD1-211ENST00000467707 C20orf173Q96LM9 149 aa5.99□□□□□ -1.45
GAPVD1-211ENST00000467707 C8orf49Q96NF6 230 aa5.99□□□□□ -1.45
GAPVD1-211ENST00000467707 ISCA1Q9BUE6 129 aa5.99□□□□□ -1.45
GAPVD1-211ENST00000467707 GJB4Q9NTQ9 266 aa5.99□□□□□ -1.45
GAPVD1-211ENST00000467707 CEP72Q9P209 647 aa5.99□□□□□ -1.45
GAPVD1-211ENST00000467707 TSC22D4Q9Y3Q8 395 aa5.99□□□□□ -1.45
GAPVD1-211ENST00000467707 TRGV11A0A075B6L2 103 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 FAM234BA2RU67 622 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 TMEM200CA6NKL6 621 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 SYT5O00445 386 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 NBNO60934 754 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 PIAS2O75928 621 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 RASAL1O95294 804 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 PRKAR1BP31321 381 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 CHKAP35790 457 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 MAGEA10P43363 369 aaPredicted RBP5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 RESTQ13127 1097 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 ELF2Q15723 593 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 RAB30Q15771 203 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 SLC5A9Q2M3M2 681 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 TMEM95Q3KNT9 176 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 CD300EQ496F6 205 aaPredicted RBP5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 CERCAMQ5T4B2 595 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 CACHD1Q5VU97 1274 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 GLIS1Q8NBF1 620 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 CPEB3Q8NE35 698 aaKnown RBP5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 TRIM63Q969Q1 353 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 PPP2R3CQ969Q6 453 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 TMEM125Q96AQ2 219 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 FAM227BQ96M60 508 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 RMDN3Q96TC7 470 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 TEX101Q9BY14 249 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.98□□□□□ -1.455e-7■■■■□ 21.8
GAPVD1-211ENST00000467707 MYLK2Q9H1R3 596 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 TMOD4Q9NZQ9 345 aa5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 NDRG4Q9ULP0 352 aaKnown RBP5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 MORC2Q9Y6X9 1032 aaPredicted RBP5.98□□□□□ -1.45
GAPVD1-211ENST00000467707 A0A087WZ62 844 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 RGS10O43665 173 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 FAM20BO75063 409 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 COQ9O75208 318 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 NDUFA10O95299 355 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 NDST3O95803 873 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 GLP2RO95838 553 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 PDIA3P30101 505 aaKnown RBP5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 PTGS2P35354 604 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 CCT5P48643 541 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 PDE6CP51160 858 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 POLE2P56282 527 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 FAM189BP81408 668 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 CCNIQ14094 377 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 PTK2BQ14289 1009 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 SPARCL1Q14515 664 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 PFKFB4Q16877 469 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 GEN1Q17RS7 908 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 USP39Q53GS9 565 aaKnown RBP5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 FBLN7Q53RD9 439 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 ARHGAP40Q5TG30 622 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 FAXCQ5TGI0 409 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 KIAA0408Q6ZU52 694 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 ZNF280BQ86YH2 543 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 SYNE4Q8N205 404 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 MYRIPQ8NFW9 859 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 IL17DQ8TAD2 202 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 FAM71BQ8TC56 605 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 NACC2Q96BF6 587 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 FAM136AQ96C01 138 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 ZDHHC12Q96GR4 267 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 SCLT1Q96NL6 688 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 CXorf36Q9H7Y0 433 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 TBCCD1Q9NVR7 557 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 DKK2Q9UBU2 259 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 FZD1Q9UP38 647 aa5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.97□□□□□ -1.45
GAPVD1-211ENST00000467707 NPC1O15118 1278 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 CD3EAPO15446 510 aaKnown RBP5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 TLR5O60602 858 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 SRGNP10124 158 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 BLOC1S1P78537 153 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 GUCY1B3Q02153 619 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 ITIH3Q06033 890 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 NSUN2Q08J23 767 aaKnown RBP eCLIP5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 ZIK1Q3SY52 487 aaPredicted RBP5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 TUBB8Q3ZCM7 444 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 TIGD2Q4W5G0 525 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 TEDDM1Q5T9Z0 273 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 RGS7BPQ6MZT1 257 aaPredicted RBP5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 CCDC174Q6PII3 467 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 CRTC1Q6UUV9 634 aa5.96□□□□□ -1.46
GAPVD1-211ENST00000467707 GATAD2AQ86YP4 633 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms