RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 CTC1Q2NKJ3 1217 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 KBTBD12Q3ZCT8 623 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 FYB2Q5VWT5 728 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 B3GNT6Q6ZMB0 384 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 ARMCX6Q7L4S7 300 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 SCUBE1Q8IWY4 988 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 SCYL3Q8IZE3 742 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 REPS2Q8NFH8 660 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 CCDC77Q9BR77 488 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 NTPCRQ9BSD7 190 aaKnown RBP18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 HERPUD2Q9BSE4 406 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 TIMMDC1Q9NPL8 285 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 ANKFY1Q9P2R3 1169 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 COQ4Q9Y3A0 265 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 CENPFP49454 3210 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 HADHBP55084 474 aaKnown RBP18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 ZNF280AP59817 542 aaPredicted RBP18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 THOC5Q13769 683 aaKnown RBP18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 MTDHQ86UE4 582 aaKnown RBP18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 SLC13A5Q86YT5 568 aaPredicted RBP18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 ATP6V0A1Q93050 837 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 HEMGNQ9BXL5 484 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 NAALADL1Q9UQQ1 740 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 WASF2Q9Y6W5 498 aa18.91■□□□□ 0.62
SNAPC3-205ENST00000467062 CYP1A2P05177 515 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 LIG4P49917 911 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 DUS1LQ6P1R4 473 aaKnown RBP18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 CYP4X1Q8N118 509 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 NSL1Q96IY1 281 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 FBXL18Q96ME1 805 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 LBHD1Q9BQE6 289 aaPredicted RBP18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 CORO1BQ9BR76 489 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 SLCO1B3Q9NPD5 702 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 TBK1Q9UHD2 729 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 LRRIQ4A6NIV6 560 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 F8W8V4 182 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 PSAPP07602 524 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 PIM1P11309 404 aaPredicted RBP18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 GJC1P36383 396 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 ADCY1Q08828 1119 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 PDK4Q16654 411 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 KYNUQ16719 465 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 ACAD10Q6JQN1 1059 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 EEPD1Q7L9B9 569 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 DIS3LQ8TF46 1054 aaKnown RBP18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 TMEM174Q8WUU8 243 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 GPRASP2Q96D09 838 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 TBCCD1Q9NVR7 557 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 MAP3K20Q9NYL2 800 aaKnown RBP18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 CLIC5Q9NZA1 410 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 BTBD7Q9P203 1132 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 DNAJB4Q9UDY4 337 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 SUN2Q9UH99 717 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 GTF3C4Q9UKN8 822 aa18.9■□□□□ 0.62
SNAPC3-205ENST00000467062 RNASEH1O60930 286 aaKnown RBP18.89■□□□□ 0.62
SNAPC3-205ENST00000467062 DGAT1O75907 488 aa18.89■□□□□ 0.62
SNAPC3-205ENST00000467062 HAUS5O94927 633 aa18.89■□□□□ 0.62
SNAPC3-205ENST00000467062 EDN1P05305 212 aa18.89■□□□□ 0.62
SNAPC3-205ENST00000467062 MLH1P40692 756 aa18.89■□□□□ 0.62
SNAPC3-205ENST00000467062 VPS41P49754 854 aa18.89■□□□□ 0.62
SNAPC3-205ENST00000467062 SIX1Q15475 284 aaPredicted RBP18.89■□□□□ 0.62
SNAPC3-205ENST00000467062 PIP4K2CQ8TBX8 421 aa18.89■□□□□ 0.62
SNAPC3-205ENST00000467062 SNRNP27Q8WVK2 155 aaKnown RBP18.89■□□□□ 0.62
SNAPC3-205ENST00000467062 OXCT2Q9BYC2 517 aaPredicted RBP18.89■□□□□ 0.62
SNAPC3-205ENST00000467062 BRD8Q9H0E9 1235 aa18.89■□□□□ 0.62
SNAPC3-205ENST00000467062 WNT8AQ9H1J5 351 aa18.89■□□□□ 0.62
SNAPC3-205ENST00000467062 PDLIM7Q9NR12 457 aa18.89■□□□□ 0.62
SNAPC3-205ENST00000467062 WHRNQ9P202 907 aa18.89■□□□□ 0.62
SNAPC3-205ENST00000467062 ZNF148Q9UQR1 794 aa18.89■□□□□ 0.62
SNAPC3-205ENST00000467062 TTLL13PA6NNM8 815 aa18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 RASA4BC9J798 803 aa18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 RASA4O43374 803 aa18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 ANPEPP15144 967 aa18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 MAPK4P31152 587 aa18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 DSG3P32926 999 aa18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 COILP38432 576 aaPredicted RBP18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 OXCT1P55809 520 aa18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 TDRD10Q5VZ19 366 aaKnown RBP18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 ABHD15Q6UXT9 468 aa18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 SPIRE2Q8WWL2 714 aa18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 PTCD3Q96EY7 689 aaKnown RBP18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 ZNF668Q96K58 619 aaPredicted RBP18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 PWWP2AQ96N64 755 aa18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 TSPAN18Q96SJ8 248 aa18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 MPHOSPH6Q99547 160 aaKnown RBP18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 TARS2Q9BW92 718 aaKnown RBP18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 TSPYL2Q9H2G4 693 aaPredicted RBP18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 UBN1Q9NPG3 1134 aa18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 CHST7Q9NS84 486 aa18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 NDE1Q9NXR1 346 aa18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 MTUS1Q9ULD2 1270 aa18.89■□□□□ 0.61
SNAPC3-205ENST00000467062 THAP12O43422 761 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 NR1H3Q13133 447 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 DCTN2Q13561 401 aaKnown RBP18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 ZNF541Q9H0D2 1346 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 BIRC5O15392 142 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 TROVE2P10155 538 aaKnown RBP eCLIP18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 AP2B1P63010 937 aa18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 HNRNPDQ14103 355 aaKnown RBP18.88■□□□□ 0.61
SNAPC3-205ENST00000467062 GRM2Q14416 872 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms