RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 GOLGA6CA6NDK9 693 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 GOLGA6BA6NDN3 693 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 FRS3O43559 492 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 CSF1RP07333 972 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 IL6RP08887 468 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-203ENST00000466732 GOLGA6DP0CG33 693 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 NDUFB7P17568 137 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 DGKEP52429 567 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 ATXN1P54253 815 aaKnown RBP4.83□□□□□ -1.64
VPS13D-203ENST00000466732 PROK1P58294 105 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 MRPS21P82921 87 aaKnown RBP4.83□□□□□ -1.64
VPS13D-203ENST00000466732 KRT17Q04695 432 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 GRM3Q14832 879 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 GFOD2Q3B7J2 385 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 PLA1AQ53H76 456 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 RNF220Q5VTB9 566 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 DCAF12L1Q5VU92 463 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 CHST15Q7LFX5 561 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-203ENST00000466732 C14orf80Q86SX3 495 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 SLC15A3Q8IY34 581 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 FAM156AQ8NDB6 213 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 TTC8Q8TAM2 541 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 RAPGEF4Q8WZA2 1011 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 ZNF518BQ9C0D4 1074 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 GLOD4Q9HC38 313 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 STK32BQ9NY57 414 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 GOLGA6AQ9NYA3 693 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 DLL3Q9NYJ7 618 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 SH2B3Q9UQQ2 575 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 WNT6Q9Y6F9 365 aa4.83□□□□□ -1.64
VPS13D-203ENST00000466732 A1L4Q6 167 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 ISM1B1AKI9 464 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 H0YIZ8 118 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 TPP1O14773 563 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 PPM1GO15355 546 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-203ENST00000466732 EIF5BO60841 1220 aaKnown RBP4.82□□□□□ -1.64
VPS13D-203ENST00000466732 RBMXL2O75526 392 aaKnown RBP4.82□□□□□ -1.64
VPS13D-203ENST00000466732 ONECUT2O95948 504 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 FESP07332 822 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 HNRNPCP07910 306 aaKnown RBP eCLIP4.82□□□□□ -1.64
VPS13D-203ENST00000466732 FAM163BP0C2L3 166 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 BRAFP15056 766 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 ZNF37AP17032 561 aaPredicted RBP4.82□□□□□ -1.64
VPS13D-203ENST00000466732 KCNA3P22001 575 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 ADORA2AP29274 412 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 PDE6CP51160 858 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 CACNB3P54284 484 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 GBX1Q14549 363 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 COLEC12Q5KU26 742 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 DEPDC1Q5TB30 811 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 ANKRD16Q6P6B7 361 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 ZNF788Q6ZQV5 615 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 CCDC149Q6ZUS6 474 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 SRGAP1Q7Z6B7 1085 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 MICU3Q86XE3 530 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 LRTOMTQ8WZ04 291 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 SACM1LQ9NTJ5 587 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 ZSCAN32Q9NX65 697 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 PADI4Q9UM07 663 aa4.82□□□□□ -1.64
VPS13D-203ENST00000466732 FRMPD2Q68DX3 1309 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-203ENST00000466732 TRIM43BA6NCK2 446 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 ZBED1O96006 694 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 HRGP04196 525 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 CYP2C18P33260 490 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 CNGA2Q16280 664 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 KIAA0753Q2KHM9 967 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 SLC44A4Q53GD3 710 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 ZDHHC24Q6UX98 284 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 WDR53Q7Z5U6 358 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-203ENST00000466732 WDR75Q8IWA0 830 aaKnown RBP4.81□□□□□ -1.64
VPS13D-203ENST00000466732 ABRAQ8N0Z2 381 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 OR56A3Q8NH54 315 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 BPIFB1Q8TDL5 484 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 OSCP1Q8WVF1 389 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 VOPP1Q96AW1 172 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 TRIM43Q96BQ3 446 aaPredicted RBP4.81□□□□□ -1.64
VPS13D-203ENST00000466732 NMD3Q96D46 503 aaKnown RBP4.81□□□□□ -1.64
VPS13D-203ENST00000466732 R3HDM4Q96D70 268 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 BHMT2Q9H2M3 363 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 METTL14Q9HCE5 456 aaKnown RBP4.81□□□□□ -1.64
VPS13D-203ENST00000466732 A1CFQ9NQ94 594 aaKnown RBP4.81□□□□□ -1.64
VPS13D-203ENST00000466732 DUSP22Q9NRW4 184 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 ADARB2Q9NS39 739 aaKnown RBP4.81□□□□□ -1.64
VPS13D-203ENST00000466732 OBP2AQ9NY56 170 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 TBC1D30Q9Y2I9 924 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 PAXBP1Q9Y5B6 917 aa4.81□□□□□ -1.64
VPS13D-203ENST00000466732 AOX1Q06278 1338 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 MBD3L4A6NDZ8 208 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-203ENST00000466732 MBD3L3A6NE82 208 aaPredicted RBP4.8□□□□□ -1.64
VPS13D-203ENST00000466732 PYCARD-AS1I3L0S3 204 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 QSOX1O00391 747 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 GOLIM4O00461 696 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 ZNF213O14771 459 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 MYF5P13349 255 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 ENGP17813 658 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 ATF3P18847 181 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 PRKAG1P54619 331 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 PDE1AP54750 535 aa4.8□□□□□ -1.64
VPS13D-203ENST00000466732 EEFSECP57772 596 aaKnown RBP4.8□□□□□ -1.64
VPS13D-203ENST00000466732 FAM193AP78312 1265 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms