RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 MACROD1Q9BQ69 325 aa4.97□□□□□ -1.61
CHMP2B-202ENST00000466696 TMEM79Q9BSE2 394 aa4.97□□□□□ -1.61
CHMP2B-202ENST00000466696 KRTAP1-5Q9BYS1 174 aa4.97□□□□□ -1.61
CHMP2B-202ENST00000466696 VPS16Q9H269 839 aa4.97□□□□□ -1.61
CHMP2B-202ENST00000466696 POC1B-GALNT4F8VUJ3 575 aa4.96□□□□□ -1.62
CHMP2B-202ENST00000466696 ERC2O15083 957 aa4.96□□□□□ -1.62
CHMP2B-202ENST00000466696 CYP2C9P11712 490 aa4.96□□□□□ -1.62
CHMP2B-202ENST00000466696 HOXB6P17509 224 aaKnown RBP4.96□□□□□ -1.62
CHMP2B-202ENST00000466696 VCAM1P19320 739 aa4.96□□□□□ -1.62
CHMP2B-202ENST00000466696 DAZAP2Q15038 168 aaPredicted RBP4.96□□□□□ -1.62
CHMP2B-202ENST00000466696 TRIP6Q15654 476 aaKnown RBP4.96□□□□□ -1.62
CHMP2B-202ENST00000466696 CERKLQ49MI3 558 aaPredicted RBP4.96□□□□□ -1.62
CHMP2B-202ENST00000466696 PXDC1Q5TGL8 231 aa4.96□□□□□ -1.62
CHMP2B-202ENST00000466696 MIS18BP1Q6P0N0 1132 aa4.96□□□□□ -1.62
CHMP2B-202ENST00000466696 GALNT4Q8N4A0 578 aa4.96□□□□□ -1.62
CHMP2B-202ENST00000466696 HMCESQ96FZ2 354 aa4.96□□□□□ -1.62
CHMP2B-202ENST00000466696 RITA1Q96K30 269 aa4.96□□□□□ -1.62
CHMP2B-202ENST00000466696 GTPBP4Q9BZE4 634 aaKnown RBP4.96□□□□□ -1.62
CHMP2B-202ENST00000466696 XPR1Q9UBH6 696 aa4.96□□□□□ -1.62
CHMP2B-202ENST00000466696 LUC7L2Q9Y383 392 aaKnown RBP4.96□□□□□ -1.62
CHMP2B-202ENST00000466696 WDR17Q8IZU2 1322 aa4.96□□□□□ -1.62
CHMP2B-202ENST00000466696 UBE2Q2LH0YL09 131 aa4.95□□□□□ -1.62
CHMP2B-202ENST00000466696 USP1O94782 785 aa4.95□□□□□ -1.62
CHMP2B-202ENST00000466696 PRKCBP05771 671 aa4.95□□□□□ -1.62
CHMP2B-202ENST00000466696 CHRM5P08912 532 aaPredicted RBP4.95□□□□□ -1.62
CHMP2B-202ENST00000466696 ARHGAP25P42331 645 aa4.95□□□□□ -1.62
CHMP2B-202ENST00000466696 PDE6CP51160 858 aa4.95□□□□□ -1.62
CHMP2B-202ENST00000466696 KIRREL2Q6UWL6 708 aa4.95□□□□□ -1.62
CHMP2B-202ENST00000466696 KRT73Q86Y46 540 aa4.95□□□□□ -1.62
CHMP2B-202ENST00000466696 PRSS3P2Q8NHM4 247 aa4.95□□□□□ -1.62
CHMP2B-202ENST00000466696 SOCS4Q8WXH5 440 aa4.95□□□□□ -1.62
CHMP2B-202ENST00000466696 NUP88Q99567 741 aaPredicted RBP4.95□□□□□ -1.62
CHMP2B-202ENST00000466696 THAP7Q9BT49 309 aaPredicted RBP4.95□□□□□ -1.62
CHMP2B-202ENST00000466696 SPRTNQ9H040 489 aaPredicted RBP4.95□□□□□ -1.62
CHMP2B-202ENST00000466696 CNNM1Q9NRU3 951 aa4.95□□□□□ -1.62
CHMP2B-202ENST00000466696 PCDHA6Q9UN73 950 aa4.95□□□□□ -1.62
CHMP2B-202ENST00000466696 GABRQQ9UN88 632 aa4.95□□□□□ -1.62
CHMP2B-202ENST00000466696 TMX2Q9Y320 296 aa4.95□□□□□ -1.62
CHMP2B-202ENST00000466696 MYO1CO00159 1063 aa4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 TRIM38O00635 465 aa4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 THP07101 528 aa4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 XRCC6P12956 609 aaKnown RBP eCLIP4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 NR4A2P43354 598 aa4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 FCRL6Q6DN72 434 aa4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 AWAT2Q6E213 333 aa4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 TECPR1Q7Z6L1 1165 aa4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 SLC15A3Q8IY34 581 aa4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 TERB1Q8NA31 727 aa4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 OSCP1Q8WVF1 389 aa4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 CHMP4CQ96CF2 233 aa4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 SNX18Q96RF0 628 aa4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 MAP3K14Q99558 947 aa4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 DPCDQ9BVM2 203 aaPredicted RBP4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 PDGFCQ9NRA1 345 aa4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 TFCP2L1Q9NZI6 479 aa4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 MED16Q9Y2X0 877 aa4.94□□□□□ -1.62
CHMP2B-202ENST00000466696 CADPSQ9ULU8 1353 aa4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 hCG_1984214I3L0E3 225 aa4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 EXOC3O60645 756 aa4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 BCAR3O75815 825 aa4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 WNT3P56703 355 aa4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 MYO1EQ12965 1108 aa4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 FHL1Q13642 323 aa4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 RABEP1Q15276 862 aa4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 L1TD1Q5T7N2 865 aaKnown RBP4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 DEPDC1Q5TB30 811 aa4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 SERPINA13PQ6UXR4 307 aa4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 ZBTB46Q86UZ6 589 aa4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 CAMKK2Q96RR4 588 aa4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 FAM118BQ9BPY3 351 aa4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 WACQ9BTA9 647 aa4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 CXorf36Q9H7Y0 433 aa4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 TCF7L1Q9HCS4 588 aa4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 TRMT13Q9NUP7 481 aaKnown RBP4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 STXBP5LQ9Y2K9 1186 aa4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 MRPS17Q9Y2R5 130 aaKnown RBP4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.93□□□□□ -1.62
CHMP2B-202ENST00000466696 PDE8BO95263 885 aa4.92□□□□□ -1.62
CHMP2B-202ENST00000466696 NTN1O95631 604 aa4.92□□□□□ -1.62
CHMP2B-202ENST00000466696 CSF1RP07333 972 aa4.92□□□□□ -1.62
CHMP2B-202ENST00000466696 CYP2A6P11509 494 aaPredicted RBP4.92□□□□□ -1.62
CHMP2B-202ENST00000466696 POLGP54098 1239 aaPredicted RBP4.92□□□□□ -1.62
CHMP2B-202ENST00000466696 FOXG1P55316 489 aaPredicted RBP4.92□□□□□ -1.62
CHMP2B-202ENST00000466696 UCP3P55916 312 aa4.92□□□□□ -1.62
CHMP2B-202ENST00000466696 KRT17Q04695 432 aa4.92□□□□□ -1.62
CHMP2B-202ENST00000466696 MGAT5BQ3V5L5 792 aa4.92□□□□□ -1.62
CHMP2B-202ENST00000466696 PIGOQ8TEQ8 1089 aa4.92□□□□□ -1.62
CHMP2B-202ENST00000466696 HPS3Q969F9 1004 aa4.92□□□□□ -1.62
CHMP2B-202ENST00000466696 C1GALT1C1Q96EU7 318 aa4.92□□□□□ -1.62
CHMP2B-202ENST00000466696 LENG8Q96PV6 779 aaPredicted RBP4.92□□□□□ -1.62
CHMP2B-202ENST00000466696 CIPCQ9C0C6 399 aa4.92□□□□□ -1.62
CHMP2B-202ENST00000466696 HOMER2Q9NSB8 354 aa4.92□□□□□ -1.62
CHMP2B-202ENST00000466696 E5RJQ4 531 aa4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 ALDH2P05091 517 aa4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 MYCLP12524 364 aaPredicted RBP4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 IL1R2P27930 398 aa4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 SLC11A2P49281 568 aa4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 RENBPP51606 427 aa4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 ZNF517Q6ZMY9 492 aaPredicted RBP4.91□□□□□ -1.62
CHMP2B-202ENST00000466696 MRPL10Q7Z7H8 261 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms