RNA–Protein interactions for RNA: ENST00000466562.5

CRAMP1-204, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 4

Gene CRAMP1, Length 534 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-204ENST00000466562 PROB1E7EW31 1015 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 NCAM2O15394 837 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 CLSTN1O94985 981 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 PSMC2P35998 433 aaKnown RBP16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 RAP1GAPP47736 663 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 MLLT6P55198 1093 aaPredicted RBP16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 EDRF1Q3B7T1 1238 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 ARHGAP29Q52LW3 1261 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 FAM186BQ8IYM0 893 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 ZNF687Q8N1G0 1237 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 B3GALNT2Q8NCR0 500 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 SPATA20Q8TB22 786 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 CSGALNACT1Q8TDX6 532 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 FAM3CQ92520 227 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 ERCC4Q92889 916 aaPredicted RBP16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 CLDN23Q96B33 292 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 ZFYVE19Q96K21 471 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 CEP295NLQ96MC4 621 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 TIGD1Q96MW7 591 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 GSDMAQ96QA5 445 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 SDCBP2Q9H190 292 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 CCL26Q9Y258 94 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 PCDHA5Q9Y5H7 936 aa16.94■□□□□ 0.3
CRAMP1-204ENST00000466562 USP34Q70CQ2 3546 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 TRIM66O15016 1216 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 ASS1P00966 412 aaKnown RBP16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 TRIM49P0CI25 452 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 TRIM49CP0CI26 452 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 KRT13P13646 458 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 ANXA13P27216 316 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 PRCPP42785 496 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 MAGEA9P43362 315 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 ENPEPQ07075 957 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 PPP3CAQ08209 521 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 ZNF658Q5TYW1 1059 aaPredicted RBP16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 SCARA5Q6ZMJ2 495 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 DENND5BQ6ZUT9 1274 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 TAF4BQ92750 862 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 USP13Q92995 863 aaPredicted RBP16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 C8orf48Q96LL4 319 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 B3GNT5Q9BYG0 378 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 ZNF518BQ9C0D4 1074 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 TDP1Q9NUW8 608 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 GTSE1Q9NYZ3 720 aa16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 NDRG2Q9UN36 371 aaKnown RBP16.93■□□□□ 0.3
CRAMP1-204ENST00000466562 F8VP50 259 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 CLDN5O00501 218 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 SMC2O95347 1197 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 HLA-DRAP01903 254 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 P4HA1P13674 534 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 CCNE1P24864 410 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 RPS9P46781 194 aaKnown RBP16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 GCLMP48507 274 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 CACNA2D1P54289 1103 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 MCCD1P59942 119 aaPredicted RBP16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 USP46P62068 366 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 PLCB2Q00722 1185 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 COBLL1Q53SF7 1204 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 SPOPLQ6IQ16 392 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 FRMD5Q7Z6J6 570 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 MAML2Q8IZL2 1156 aaPredicted RBP16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 TTC8Q8TAM2 541 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 EEF2KMTQ96G04 330 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 CYP2S1Q96SQ9 504 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 ELOVL4Q9GZR5 314 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 C8orf33Q9H7E9 229 aaPredicted RBP16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 TMEM30AQ9NV96 361 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 SPATA6Q9NWH7 488 aaPredicted RBP16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 THG1LQ9NWX6 298 aaKnown RBP16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 COL4A2P08572 1712 aa16.92■□□□□ 0.3
CRAMP1-204ENST00000466562 SP9P0CG40 484 aa16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 PIK3CAP42336 1068 aa16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 ASPAP45381 313 aa16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 SOX9P48436 509 aa16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 KPNA1P52294 538 aaPredicted RBP16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 NOP14P78316 857 aaKnown RBP16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 TNK2Q07912 1038 aa16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 ZNF268Q14587 947 aaPredicted RBP16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 ELOA2Q8IYF1 753 aaPredicted RBP16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 RIN3Q8TB24 985 aa16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 TAS1R2Q8TE23 839 aa16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 SMARCE1Q969G3 411 aa16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 MSANTD3Q96H12 275 aa16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 TNIP3Q96KP6 325 aa16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 SLC22A12Q96S37 553 aa16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 FAM83CQ9BQN1 747 aa16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 TTLL2Q9BWV7 592 aa16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 MMRN2Q9H8L6 949 aa16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 KIF9Q9HAQ2 790 aa16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 TRPC7Q9HCX4 862 aa16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 GKN1Q9NS71 199 aa16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 HOOK1Q9UJC3 728 aaKnown RBP16.91■□□□□ 0.3
CRAMP1-204ENST00000466562 NUP210Q8TEM1 1887 aaPredicted RBP16.9■□□□□ 0.3
CRAMP1-204ENST00000466562 C2orf78A6NCI8 922 aa16.9■□□□□ 0.3
CRAMP1-204ENST00000466562 CETN3O15182 167 aa16.9■□□□□ 0.3
CRAMP1-204ENST00000466562 LAMTOR5O43504 91 aa16.9■□□□□ 0.3
CRAMP1-204ENST00000466562 GFRA3O60609 400 aa16.9■□□□□ 0.3
CRAMP1-204ENST00000466562 C1orf228Q6PIY5 440 aa16.9■□□□□ 0.3
CRAMP1-204ENST00000466562 PAQR9Q6ZVX9 377 aa16.9■□□□□ 0.3
CRAMP1-204ENST00000466562 ACOT1Q86TX2 421 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms