RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 OR5B17Q8NGF7 314 aa10.62□□□□□ -0.71
PMF1-204ENST00000466489 MAFAQ8NHW3 353 aaPredicted RBP10.62□□□□□ -0.71
PMF1-204ENST00000466489 SPATA18Q8TC71 538 aa10.62□□□□□ -0.71
PMF1-204ENST00000466489 SENP8Q96LD8 212 aa10.62□□□□□ -0.71
PMF1-204ENST00000466489 SPAG5Q96R06 1193 aa10.62□□□□□ -0.71
PMF1-204ENST00000466489 POP1Q99575 1024 aaKnown RBP10.62□□□□□ -0.71
PMF1-204ENST00000466489 CHST7Q9NS84 486 aa10.62□□□□□ -0.71
PMF1-204ENST00000466489 FAM207AQ9NSI2 230 aaPredicted RBP10.62□□□□□ -0.71
PMF1-204ENST00000466489 FNIP2Q9P278 1114 aa10.62□□□□□ -0.71
PMF1-204ENST00000466489 RRP15Q9Y3B9 282 aaKnown RBP10.62□□□□□ -0.71
PMF1-204ENST00000466489 TRANK1O15050 2925 aa10.62□□□□□ -0.71
PMF1-204ENST00000466489 MTCL1Q9Y4B5 1905 aaKnown RBP10.62□□□□□ -0.71
PMF1-204ENST00000466489 CHD7Q9P2D1 2997 aa10.62□□□□□ -0.71
PMF1-204ENST00000466489 PTPRJQ12913 1337 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 TSC2P49815 1807 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 I3L4J1 428 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 CYB561D2O14569 222 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 STAU1O95793 577 aaKnown RBP10.61□□□□□ -0.71
PMF1-204ENST00000466489 C1RP00736 705 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 AFPP02771 609 aaKnown RBP10.61□□□□□ -0.71
PMF1-204ENST00000466489 TRIM49P0CI25 452 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 TRIM49CP0CI26 452 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 TKTP29401 623 aaKnown RBP10.61□□□□□ -0.71
PMF1-204ENST00000466489 IRS1P35568 1242 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 GCLMP48507 274 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 NRIP1P48552 1158 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 WNT7BP56706 349 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 CORO7P57737 925 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 MYL7Q01449 175 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 CAMK1Q14012 370 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 CCDC85BQ15834 202 aaPredicted RBP10.61□□□□□ -0.71
PMF1-204ENST00000466489 ASTE1Q2TB18 679 aaPredicted RBP10.61□□□□□ -0.71
PMF1-204ENST00000466489 WDR72Q3MJ13 1102 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 CTXN3Q4LDR2 81 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 TDRD12Q587J7 1177 aaKnown RBP10.61□□□□□ -0.71
PMF1-204ENST00000466489 TCEAL5Q5H9L2 206 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 WDR44Q5JSH3 913 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 RTP2Q5QGT7 225 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 VARS2Q5ST30 1063 aaKnown RBP10.61□□□□□ -0.71
PMF1-204ENST00000466489 KIAA0319Q5VV43 1072 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 TDRD10Q5VZ19 366 aaKnown RBP10.61□□□□□ -0.71
PMF1-204ENST00000466489 PPP1R2P3Q6NXS1 205 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 SV2AQ7L0J3 742 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 DPH6Q7L8W6 267 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 RBM23Q86U06 439 aaKnown RBP10.61□□□□□ -0.71
PMF1-204ENST00000466489 TOP6BLQ8N6T0 577 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 FBXL13Q8NEE6 735 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 VN1R3Q9BXE9 311 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 RAB17Q9H0T7 212 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 IGFLR1Q9H665 355 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 CNOT10Q9H9A5 744 aaKnown RBP10.61□□□□□ -0.71
PMF1-204ENST00000466489 GDF3Q9NR23 364 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 FAM114A2Q9NRY5 505 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 GDAP2Q9NXN4 497 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 ARHGAP20Q9P2F6 1191 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 FEZ2Q9UHY8 353 aaPredicted RBP10.61□□□□□ -0.71
PMF1-204ENST00000466489 SNX9Q9Y5X1 595 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 BACE2Q9Y5Z0 518 aa10.61□□□□□ -0.71
PMF1-204ENST00000466489 OR6C75A6NL08 312 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 HIDE1A8MVS5 230 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 MYO1CO00159 1063 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 ENC1O14682 589 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 NDC80O14777 642 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 PPEF2O14830 753 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 P4HA2O15460 535 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 EFEMP2O95967 443 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 GLUD1P00367 558 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 HLA-DRAP01903 254 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 C4BPAP04003 597 aaKnown RBP10.6□□□□□ -0.71
PMF1-204ENST00000466489 CYP11A1P05108 521 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 MYZAPP0CAP1 466 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 CPB1P15086 417 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 PCSK1P29120 753 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 LHX1P48742 406 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 DLG4P78352 724 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 TSPY1Q01534 308 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 DUSP6Q16828 381 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 EXOC3L4Q17RC7 722 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 MEI1Q5TIA1 1274 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 LIN9Q5TKA1 542 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 ADGRF2Q8IZF7 708 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 TTC39CQ8N584 583 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 EFHBQ8N7U6 833 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 AUTS2Q8WXX7 1259 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 BAP1Q92560 729 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 CASP10Q92851 521 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 SLC35C1Q96A29 364 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 B3GALT6Q96L58 329 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 LACRTQ9GZZ8 138 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 RXFP1Q9HBX9 757 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 DZANK1Q9NVP4 752 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 CLDND1Q9NY35 253 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 MTRRQ9UBK8 725 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 NXF1Q9UBU9 619 aaKnown RBP10.6□□□□□ -0.71
PMF1-204ENST00000466489 SIX4Q9UIU6 781 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 COG5Q9UP83 839 aa10.6□□□□□ -0.71
PMF1-204ENST00000466489 GOLGA6L7A0A1B0GV03 622 aa10.59□□□□□ -0.71
PMF1-204ENST00000466489 LRRC53A6NM62 1247 aa10.59□□□□□ -0.71
PMF1-204ENST00000466489 MIF4GDA9UHW6 222 aaKnown RBP10.59□□□□□ -0.71
PMF1-204ENST00000466489 H3BQF6 201 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms