RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 FAM50BQ9Y247 325 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 YBX2Q9Y2T7 364 aaKnown RBP3.76□□□□□ -1.81
SORT1-202ENST00000466471 B3GALT1Q9Y5Z6 326 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 DGKBQ9Y6T7 804 aa3.76□□□□□ -1.81
SORT1-202ENST00000466471 RALGAPA2Q2PPJ7 1873 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 COL11A1P12107 1806 aaPredicted RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 GRXCR1A8MXD5 290 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 H0Y858 1186 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 SH2B2O14492 632 aaPredicted RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 KIAA0355O15063 1070 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 TLR5O60602 858 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 URI1O94763 535 aaPredicted RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 SEC31AO94979 1220 aaKnown RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 ZNF202O95125 648 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 SLC3A2P08195 630 aaKnown RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 LCP1P13796 627 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 FDPSP14324 419 aaKnown RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 PDE6AP16499 860 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 JUNBP17275 347 aaPredicted RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 TNFRSF8P28908 595 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 HNRNPH1P31943 449 aaKnown RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 LMAN1P49257 510 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 AGFG1P52594 562 aaKnown RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 VCPP55072 806 aaKnown RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 UBASH3AP57075 661 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 PCBP3P57721 371 aaKnown RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 GPSM2P81274 684 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 FPGSQ05932 587 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 FOXD4Q12950 439 aaPredicted RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 DCTN1Q14203 1278 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 CASP8Q14790 479 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 POLD3Q15054 466 aaPredicted RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 CLUL1Q15846 466 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 LONRF1Q17RB8 773 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 DPCR1Q3MIW9 517 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 PREPLQ4J6C6 727 aaPredicted RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 HYIQ5T013 277 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 PAPD7Q5XG87 772 aaKnown RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 TSHZ3Q63HK5 1081 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 SPECC1LQ69YQ0 1117 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 XRRA1Q6P2D8 792 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 FAM173BQ6P4H8 233 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 TLDC1Q6P9B6 456 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 CCDC174Q6PII3 467 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 CRTC3Q6UUV7 619 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 RNF111Q6ZNA4 994 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 CCDC129Q6ZRS4 1044 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 ZNF765Q7L2R6 523 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 OVCH2Q7RTZ1 564 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 TMC6Q7Z403 805 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 KCNK18Q7Z418 384 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 RIOX2Q8IUF8 465 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 CD302Q8IX05 232 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 C10orf67Q8IYJ2 551 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 CISD2Q8N5K1 135 aaKnown RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 OR2C3Q8N628 320 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 AOPEPQ8N6M6 819 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 FSIP1Q8NA03 581 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 MLKLQ8NB16 471 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 COA7Q96BR5 231 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 TCTN2Q96GX1 697 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 TMEM169Q96HH4 297 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 PTCHD1Q96NR3 888 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 WDR24Q96S15 920 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 CDC5LQ99459 802 aaKnown RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 ELF4Q99607 663 aaPredicted RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 ACO2Q99798 780 aaKnown RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 BAG1Q99933 345 aaPredicted RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 DUSP23Q9BVJ7 150 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 EPB41L1Q9H4G0 881 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 UBE2ZQ9H832 354 aaPredicted RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 ZMAT4Q9H898 229 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 SLC28A3Q9HAS3 691 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 PDE11AQ9HCR9 933 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 GPR108Q9NPR9 543 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 TLR9Q9NR96 1032 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 HELLSQ9NRZ9 838 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 KCNH7Q9NS40 1196 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 RBM28Q9NW13 759 aaKnown RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 DNAJC28Q9NX36 388 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 H2AFY2Q9P0M6 372 aaPredicted RBP3.75□□□□□ -1.81
SORT1-202ENST00000466471 CLEC1BQ9P126 229 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.75□□□□□ -1.81
SORT1-202ENST00000466471 MSRAQ9UJ68 235 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 GJD2Q9UKL4 321 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 ATP11BQ9Y2G3 1177 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 LRCH1Q9Y2L9 728 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 DAGLAQ9Y4D2 1042 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 PCDHA2Q9Y5H9 948 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 X6R8D5 127 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 LOC285556D6RIA3 1793 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 FREM2Q5SZK8 3169 aa3.75□□□□□ -1.81
SORT1-202ENST00000466471 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.74□□□□□ -1.81
SORT1-202ENST00000466471 TMEM221A6NGB7 291 aa3.74□□□□□ -1.81
SORT1-202ENST00000466471 GNAT3A8MTJ3 354 aa3.74□□□□□ -1.81
SORT1-202ENST00000466471 F5H423 210 aaPredicted RBP3.74□□□□□ -1.81
SORT1-202ENST00000466471 M0R296 226 aa3.74□□□□□ -1.81
SORT1-202ENST00000466471 AGPSO00116 658 aa3.74□□□□□ -1.81
SORT1-202ENST00000466471 DNM1LO00429 736 aa3.74□□□□□ -1.81
SORT1-202ENST00000466471 CHUKO15111 745 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms