RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 ECHDC2Q86YB7 292 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 KIAA0319LQ8IZA0 1049 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 TAB3Q8N5C8 712 aaPredicted RBP19.22■□□□□ 0.67
SYNE4-204ENST00000465425 HSPH1Q92598 858 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 CDT1Q9H211 546 aa19.22■□□□□ 0.67
SYNE4-204ENST00000465425 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.22■□□□□ 0.67
SYNE4-204ENST00000465425 MCF2LO15068 1137 aa19.21■□□□□ 0.67
SYNE4-204ENST00000465425 ERBB2P04626 1255 aa19.21■□□□□ 0.67
SYNE4-204ENST00000465425 CD48P09326 243 aa19.21■□□□□ 0.67
SYNE4-204ENST00000465425 KRT4P19013 534 aa19.21■□□□□ 0.67
SYNE4-204ENST00000465425 CLCN3P51790 818 aa19.21■□□□□ 0.67
SYNE4-204ENST00000465425 GPX6P59796 221 aa19.21■□□□□ 0.67
SYNE4-204ENST00000465425 PTPN11Q06124 597 aaPredicted RBP19.21■□□□□ 0.67
SYNE4-204ENST00000465425 CCDC15Q0P6D6 951 aa19.21■□□□□ 0.67
SYNE4-204ENST00000465425 SEPT7Q16181 437 aaKnown RBP19.21■□□□□ 0.67
SYNE4-204ENST00000465425 ANKRD22Q5VYY1 191 aa19.21■□□□□ 0.67
SYNE4-204ENST00000465425 C3orf62Q6ZUJ4 267 aa19.21■□□□□ 0.67
SYNE4-204ENST00000465425 TMEM192Q8IY95 271 aa19.21■□□□□ 0.67
SYNE4-204ENST00000465425 KIF2BQ8N4N8 673 aa19.21■□□□□ 0.67
SYNE4-204ENST00000465425 C1orf127Q8N9H9 656 aa19.21■□□□□ 0.67
SYNE4-204ENST00000465425 CALN1Q9BXU9 219 aa19.21■□□□□ 0.67
SYNE4-204ENST00000465425 TNFSF13BQ9Y275 285 aa19.21■□□□□ 0.67
SYNE4-204ENST00000465425 WDR90Q96KV7 1748 aa19.21■□□□□ 0.67
SYNE4-204ENST00000465425 A0A1W2PPM1 405 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 ITGB3P05106 788 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 NFICP08651 508 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 SSTR1P30872 391 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 RPL22P35268 128 aaKnown RBP19.2■□□□□ 0.66
SYNE4-204ENST00000465425 BRCA1P38398 1863 aaKnown RBP19.2■□□□□ 0.66
SYNE4-204ENST00000465425 GSCP56915 257 aaPredicted RBP19.2■□□□□ 0.66
SYNE4-204ENST00000465425 KLHL38Q2WGJ6 581 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 PALM2Q8IXS6 379 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 PDIK1LQ8N165 341 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 NAT8LQ8N9F0 302 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 SPOCK2Q92563 424 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 THOC1Q96FV9 657 aaKnown RBP19.2■□□□□ 0.66
SYNE4-204ENST00000465425 SMYD3Q9H7B4 428 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 YY1AP1Q9H869 796 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 FETUBQ9UGM5 382 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 SIX4Q9UIU6 781 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 RABGEF1Q9UJ41 708 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 APOC4-APOC2K7ER74 178 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 M0QYV0 167 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 APOC2P02655 101 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 IBSPP21815 317 aaPredicted RBP19.2■□□□□ 0.66
SYNE4-204ENST00000465425 SKIV2L2P42285 1042 aaKnown RBP19.2■□□□□ 0.66
SYNE4-204ENST00000465425 SLC26A2P50443 739 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 EIF3EP60228 445 aaKnown RBP19.2■□□□□ 0.66
SYNE4-204ENST00000465425 BASP1P80723 227 aaKnown RBP19.2■□□□□ 0.66
SYNE4-204ENST00000465425 GAD2Q05329 585 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 MBTD1Q05BQ5 628 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 FNBP1LQ5T0N5 605 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 RGS9BPQ6ZS82 235 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 SLC4A11Q8NBS3 891 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 FBXO36Q8NEA4 188 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 TMEM176AQ96HP8 235 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 SMARCAD1Q9H4L7 1026 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 SLCO1B3Q9NPD5 702 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 USP18Q9UMW8 372 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 STK38LQ9Y2H1 464 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 USH1CQ9Y6N9 552 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 CLUHO75153 1309 aa19.2■□□□□ 0.66
SYNE4-204ENST00000465425 SMAPO00193 183 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 TYROBPO43914 113 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 P4HA1P13674 534 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 ATP2A2P16615 1042 aaKnown RBP19.19■□□□□ 0.66
SYNE4-204ENST00000465425 MIPP30301 263 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 ACAP1Q15027 740 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 FAM71DQ8N9W8 422 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 FAXDC2Q96IV6 333 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 ADPGKQ9BRR6 497 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 TACO1Q9BSH4 297 aaKnown RBP19.19■□□□□ 0.66
SYNE4-204ENST00000465425 MAK16Q9BXY0 300 aaKnown RBP19.19■□□□□ 0.66
SYNE4-204ENST00000465425 MINDY3Q9H8M7 445 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 ARHGEF3Q9NR81 526 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 ASNSD1Q9NWL6 643 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 XPO7Q9UIA9 1087 aaKnown RBP19.19■□□□□ 0.66
SYNE4-204ENST00000465425 HBP1O60381 514 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 MICAL2O94851 1124 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 ZWINTO95229 277 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 RBP3P10745 1247 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 ALDH3A1P30838 453 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 EFTUD2Q15029 972 aaKnown RBP eCLIP19.19■□□□□ 0.661e-7■■■■■ 52.3
SYNE4-204ENST00000465425 SLC1A5Q15758 541 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 TAZQ16635 292 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 BBS9Q3SYG4 887 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 MSS51Q4VC12 460 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 FAM102AQ5T9C2 384 aaPredicted RBP19.19■□□□□ 0.66
SYNE4-204ENST00000465425 LVRNQ6Q4G3 990 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 DPH6Q7L8W6 267 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 VSIG1Q86XK7 387 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 UNC45BQ8IWX7 931 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 SPATA18Q8TC71 538 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 ZBTB10Q96DT7 871 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 LRRC37BQ96QE4 947 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 PAFAH2Q99487 392 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 SDCBP2Q9H190 292 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 TXLNGQ9NUQ3 528 aa19.19■□□□□ 0.66
SYNE4-204ENST00000465425 PRMT7Q9NVM4 692 aaPredicted RBP19.19■□□□□ 0.66
SYNE4-204ENST00000465425 HMGXB4Q9UGU5 601 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms