RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 MAP3K13O43283 966 aa12.94□□□□□ -0.34
TRA2B-208ENST00000465245 NOL4O94818 638 aa12.94□□□□□ -0.34
TRA2B-208ENST00000465245 FAM13AO94988 1023 aa12.94□□□□□ -0.34
TRA2B-208ENST00000465245 ENGP17813 658 aa12.94□□□□□ -0.34
TRA2B-208ENST00000465245 CYP2F1P24903 491 aa12.94□□□□□ -0.34
TRA2B-208ENST00000465245 SIM1P81133 766 aaPredicted RBP12.94□□□□□ -0.34
TRA2B-208ENST00000465245 KCNB1Q14721 858 aa12.94□□□□□ -0.34
TRA2B-208ENST00000465245 CRY1Q16526 586 aa12.94□□□□□ -0.34
TRA2B-208ENST00000465245 LMBRD2Q68DH5 695 aaPredicted RBP12.94□□□□□ -0.34
TRA2B-208ENST00000465245 MYCT1Q8N699 235 aa12.94□□□□□ -0.34
TRA2B-208ENST00000465245 ARL14EPQ8N8R7 260 aaPredicted RBP12.94□□□□□ -0.34
TRA2B-208ENST00000465245 FSIP1Q8NA03 581 aa12.94□□□□□ -0.34
TRA2B-208ENST00000465245 LEO1Q8WVC0 666 aaPredicted RBP12.94□□□□□ -0.34
TRA2B-208ENST00000465245 ZNF560Q96MR9 790 aa12.94□□□□□ -0.34
TRA2B-208ENST00000465245 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.94□□□□□ -0.34
TRA2B-208ENST00000465245 MYO18AQ92614 2054 aaKnown RBP12.93□□□□□ -0.34
TRA2B-208ENST00000465245 ATXN2Q99700 1313 aaKnown RBP12.93□□□□□ -0.34
TRA2B-208ENST00000465245 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 C2orf78A6NCI8 922 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 ANTXRLA6NF34 631 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 OPRD1P41143 372 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 P2RY2P41231 377 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 ZC2HC1CQ53FD0 456 aaPredicted RBP12.93□□□□□ -0.34
TRA2B-208ENST00000465245 ADALQ6DHV7 355 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 TMEM92Q6UXU6 159 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 GPBP1Q86WP2 473 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 SYT12Q8IV01 421 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 TMEFF1Q8IYR6 380 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 OLIG1Q8TAK6 271 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 WHAMMQ8TF30 809 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 RLN3Q8WXF3 142 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 MYRFLQ96LU7 910 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 LINC00597Q9H2U6 94 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 PARVGQ9HBI0 331 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 ABCB6Q9NP58 842 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 TMEM74BQ9NUR3 256 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 LIMCH1Q9UPQ0 1083 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 IGSF10Q6WRI0 2623 aa12.93□□□□□ -0.34
TRA2B-208ENST00000465245 VWA3AA6NCI4 1184 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 TISP43B9A030 160 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 ANKRD63C9JTQ0 380 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 TNFRSF10BO14763 440 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 TRAK2O60296 914 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 CFIP05156 583 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 HNRNPLP14866 589 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRA2B-208ENST00000465245 TCF3P15923 654 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 ACAT1P24752 427 aaKnown RBP12.92□□□□□ -0.34
TRA2B-208ENST00000465245 ABCD1P33897 745 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 PNPLA4P41247 253 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 PTGER3P43115 390 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 ATXN3P54252 364 aaPredicted RBP12.92□□□□□ -0.34
TRA2B-208ENST00000465245 MRPS21P82921 87 aaKnown RBP12.92□□□□□ -0.34
TRA2B-208ENST00000465245 ATP2C1P98194 919 aaPredicted RBP12.92□□□□□ -0.34
TRA2B-208ENST00000465245 MYL7Q01449 175 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 TMEM119Q4V9L6 283 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 INTS6LQ5JSJ4 861 aaKnown RBP12.92□□□□□ -0.34
TRA2B-208ENST00000465245 SLC23A3Q6PIS1 610 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 SCN4BQ8IWT1 228 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 PDCL2Q8N4E4 241 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 HDDC3Q8N4P3 179 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 ALLCQ8N6M5 410 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 TXNDC5Q8NBS9 432 aaKnown RBP12.92□□□□□ -0.34
TRA2B-208ENST00000465245 FNBP1Q96RU3 617 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 ACBD6Q9BR61 282 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 ZHX3Q9H4I2 956 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 DDX43Q9NXZ2 648 aaKnown RBP12.92□□□□□ -0.34
TRA2B-208ENST00000465245 GCNT4Q9P109 453 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 BCCIPQ9P287 314 aaKnown RBP eCLIP12.92□□□□□ -0.343e-7■■■■□ 23.8
TRA2B-208ENST00000465245 GTF3C4Q9UKN8 822 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 AGO2Q9UKV8 859 aaKnown RBP12.92□□□□□ -0.34
TRA2B-208ENST00000465245 L1RE1Q9UN81 338 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 ARHGAP26Q9UNA1 814 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 PCDH15Q96QU1 1955 aa12.92□□□□□ -0.34
TRA2B-208ENST00000465245 H0Y626 953 aa12.91□□□□□ -0.34
TRA2B-208ENST00000465245 TAF4O00268 1085 aa12.91□□□□□ -0.34
TRA2B-208ENST00000465245 TULP1O00294 542 aaPredicted RBP12.91□□□□□ -0.34
TRA2B-208ENST00000465245 HUS1O60921 280 aa12.91□□□□□ -0.34
TRA2B-208ENST00000465245 TRIM16O95361 564 aa12.91□□□□□ -0.34
TRA2B-208ENST00000465245 KRT18P05783 430 aaKnown RBP12.91□□□□□ -0.34
TRA2B-208ENST00000465245 HDCP19113 662 aa12.91□□□□□ -0.34
TRA2B-208ENST00000465245 RDXP35241 583 aaKnown RBP12.91□□□□□ -0.34
TRA2B-208ENST00000465245 TIE1P35590 1138 aa12.91□□□□□ -0.34
TRA2B-208ENST00000465245 DPP6P42658 865 aa12.91□□□□□ -0.34
TRA2B-208ENST00000465245 PDE6CP51160 858 aa12.91□□□□□ -0.34
TRA2B-208ENST00000465245 ZNF131P52739 623 aa12.91□□□□□ -0.34
TRA2B-208ENST00000465245 SEMA3BQ13214 749 aa12.91□□□□□ -0.34
TRA2B-208ENST00000465245 DHX8Q14562 1220 aaKnown RBP12.91□□□□□ -0.34
TRA2B-208ENST00000465245 LYSMD4Q5XG99 296 aa12.91□□□□□ -0.34
TRA2B-208ENST00000465245 SLFN12LQ6IEE8 588 aa12.91□□□□□ -0.34
TRA2B-208ENST00000465245 PIP4P1Q86T03 277 aa12.91□□□□□ -0.34
TRA2B-208ENST00000465245 SPATA2LQ8IUW3 424 aaPredicted RBP12.91□□□□□ -0.34
TRA2B-208ENST00000465245 FRMD1Q8N878 549 aa12.91□□□□□ -0.34
TRA2B-208ENST00000465245 SPATA18Q8TC71 538 aa12.91□□□□□ -0.34
TRA2B-208ENST00000465245 GTPBP2Q9BX10 602 aaKnown RBP12.91□□□□□ -0.34
TRA2B-208ENST00000465245 POLMQ9NP87 494 aaPredicted RBP12.91□□□□□ -0.34
TRA2B-208ENST00000465245 FSCN3Q9NQT6 498 aa12.91□□□□□ -0.34
TRA2B-208ENST00000465245 MBD1Q9UIS9 605 aaPredicted RBP12.91□□□□□ -0.34
TRA2B-208ENST00000465245 SETXQ7Z333 2677 aaKnown RBP12.91□□□□□ -0.34
TRA2B-208ENST00000465245 CELSR3Q9NYQ7 3312 aa12.91□□□□□ -0.34
TRA2B-208ENST00000465245 MYMKA6NI61 221 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms