RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 DNAI2Q9GZS0 605 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 RXFP1Q9HBX9 757 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 FAM49BQ9NUQ9 324 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 TMLHEQ9NVH6 421 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 SSX2IPQ9Y2D8 614 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 IRAK3Q9Y616 596 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 CDY1Q9Y6F8 540 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 V9GYY5 206 aaPredicted RBP17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 TSC2P49815 1807 aa17.94■□□□□ 0.46
EXOSC3-203ENST00000465229 BTNL10A8MVZ5 291 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 FSCN2O14926 492 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 THAP12O43422 761 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 OR1D2P34982 312 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 IRS1P35568 1242 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 PDE6CP51160 858 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 SGO2Q562F6 1265 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 GPR161Q8N6U8 529 aaKnown RBP17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 SLC20A1Q8WUM9 679 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 CYFIP2Q96F07 1278 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 SYT11Q9BT88 431 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 ZNF576Q9H609 170 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 NGRNQ9NPE2 291 aaKnown RBP17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 ENTPD7Q9NQZ7 604 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 FNIP2Q9P278 1114 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 TFR2Q9UP52 801 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 JRKLQ9Y4A0 524 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 PCDHGC5Q9Y5F6 944 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 DUSP10Q9Y6W6 482 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 PLXNA4Q9HCM2 1894 aa17.93■□□□□ 0.46
EXOSC3-203ENST00000465229 HIDE1A8MVS5 230 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 RFXAPO00287 272 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 O00370 1275 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 CSPG5O95196 566 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 CFHP08603 1231 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 CNPP09543 421 aaKnown RBP17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 CCDC130P13994 396 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 H2AFXP16104 143 aaPredicted RBP17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 CHRNB2P17787 502 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 ARPP19P56211 112 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 BMS1Q14692 1282 aaKnown RBP17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 CNGA2Q16280 664 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 SLC39A12Q504Y0 691 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 PPP1R26Q5T8A7 1209 aaPredicted RBP17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 ARHGAP17Q68EM7 881 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 PAQR9Q6ZVX9 377 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 ZNF571Q7Z3V5 609 aaPredicted RBP17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 VPS36Q86VN1 386 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 DCP1BQ8IZD4 617 aaKnown RBP17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 MICAL1Q8TDZ2 1067 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 GDPD5Q8WTR4 605 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 PCED1BQ96HM7 432 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 ALS2CR12Q96Q35 445 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 B3GNT5Q9BYG0 378 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 SAR1BQ9Y6B6 198 aa17.92■□□□□ 0.46
EXOSC3-203ENST00000465229 A0A087X0T9 212 aa17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 C2orf71A6NGG8 1288 aa17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 TEX28O15482 410 aa17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 FAM228BP0C875 321 aa17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 PRLRP16471 622 aa17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 CDR2Q01850 454 aa17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 ROR1Q01973 937 aa17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 GPR17Q13304 367 aa17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 SMC1AQ14683 1233 aaKnown RBP17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 MAPRE1Q15691 268 aaKnown RBP17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 TAF3Q5VWG9 929 aa17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 PLPP4Q5VZY2 271 aa17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 GLYCTKQ8IVS8 523 aa17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 FUKQ8N0W3 1084 aa17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 OLIG1Q8TAK6 271 aa17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 SLC2A14Q8TDB8 520 aa17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 HNRNPABQ99729 332 aaKnown RBP17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 AGPAT1Q99943 283 aa17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 NENFQ9UMX5 172 aa17.91■□□□□ 0.46
EXOSC3-203ENST00000465229 MACROD2A1Z1Q3 448 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 CLDN5O00501 218 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 SOX1O00570 391 aaPredicted RBP17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 LPXNO60711 386 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 MMEP08473 750 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 CPB1P15086 417 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 SSTR3P32745 418 aaPredicted RBP17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 CA8P35219 290 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 FMO1Q01740 532 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 RAB33AQ14088 237 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 LCLAT1Q6UWP7 414 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 ZNF677Q86XU0 584 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 MYLPFQ96A32 169 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 RPGRIP1Q96KN7 1286 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 NOX5Q96PH1 765 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 LMAN2LQ9H0V9 348 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 ADAMTS1Q9UHI8 967 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 WDR27A2RRH5 827 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 MED7O43513 233 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 ATP1A1P05023 1023 aaKnown RBP17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 CREMQ03060 361 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 STILQ15468 1287 aa17.9■□□□□ 0.46
EXOSC3-203ENST00000465229 NFE2Q16621 373 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms