RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 PHLDB3Q6NSJ2 640 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 TMC8Q8IU68 726 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 CREBRFQ8IUR6 639 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 DHX40Q8IX18 779 aaKnown RBP14.55□□□□□ -0.08
LIMD1-203ENST00000465039 SLC4A11Q8NBS3 891 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 GCNAQ96QF7 691 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 TWNKQ96RR1 684 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 CORO1BQ9BR76 489 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 B3GNT5Q9BYG0 378 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 IGSF9Q9P2J2 1179 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 MRPS23Q9Y3D9 190 aaKnown RBP14.55□□□□□ -0.08
LIMD1-203ENST00000465039 C5orf42Q9H799 3197 aa14.55□□□□□ -0.08
LIMD1-203ENST00000465039 RTN3O95197 1032 aaPredicted RBP14.54□□□□□ -0.08
LIMD1-203ENST00000465039 FAM200BP0CF97 657 aa14.54□□□□□ -0.08
LIMD1-203ENST00000465039 HMGA1P17096 107 aaKnown RBP14.54□□□□□ -0.08
LIMD1-203ENST00000465039 CDK11BP21127 795 aaKnown RBP14.54□□□□□ -0.08
LIMD1-203ENST00000465039 BDNFP23560 247 aa14.54□□□□□ -0.08
LIMD1-203ENST00000465039 SLC8A3P57103 927 aa14.54□□□□□ -0.08
LIMD1-203ENST00000465039 TAF12Q16514 161 aa14.54□□□□□ -0.08
LIMD1-203ENST00000465039 DENND5BQ6ZUT9 1274 aa14.54□□□□□ -0.08
LIMD1-203ENST00000465039 PAQR9Q6ZVX9 377 aa14.54□□□□□ -0.08
LIMD1-203ENST00000465039 MTSS1LQ765P7 747 aa14.54□□□□□ -0.08
LIMD1-203ENST00000465039 APTXQ7Z2E3 356 aaKnown RBP14.54□□□□□ -0.08
LIMD1-203ENST00000465039 NPAS3Q8IXF0 933 aa14.54□□□□□ -0.08
LIMD1-203ENST00000465039 SLC2A14Q8TDB8 520 aa14.54□□□□□ -0.08
LIMD1-203ENST00000465039 OVCA2Q8WZ82 227 aa14.54□□□□□ -0.08
LIMD1-203ENST00000465039 SHC3Q92529 594 aa14.54□□□□□ -0.08
LIMD1-203ENST00000465039 FGF13Q92913 245 aa14.54□□□□□ -0.08
LIMD1-203ENST00000465039 CYFIP2Q96F07 1278 aa14.54□□□□□ -0.08
LIMD1-203ENST00000465039 UBXN6Q9BZV1 441 aa14.54□□□□□ -0.08
LIMD1-203ENST00000465039 ZNF518BQ9C0D4 1074 aa14.54□□□□□ -0.08
LIMD1-203ENST00000465039 KRT82Q9NSB4 513 aa14.54□□□□□ -0.08
LIMD1-203ENST00000465039 TCF20Q9UGU0 1960 aaKnown RBP14.53□□□□□ -0.08
LIMD1-203ENST00000465039 GREB1Q4ZG55 1949 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 FAM92AA1XBS5 289 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 F8VP50 259 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 VDRP11473 427 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 LAMP2P13473 410 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 NPR3P17342 541 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 GRIK1P39086 918 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 PDE6CP51160 858 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 COPB1P53618 953 aaKnown RBP14.53□□□□□ -0.08
LIMD1-203ENST00000465039 LRMPQ12912 555 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 CCDC142Q17RM4 750 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 SLC5A9Q2M3M2 681 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 ARHGAP15Q53QZ3 475 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 SGO2Q562F6 1265 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 TMEM270Q6UE05 265 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 ARHGEF19Q8IW93 802 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 PDZD8Q8NEN9 1154 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 E2F7Q96AV8 911 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 ELMO3Q96BJ8 720 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 RPGRIP1Q96KN7 1286 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 HEXIM2Q96MH2 286 aaKnown RBP14.53□□□□□ -0.08
LIMD1-203ENST00000465039 KREMEN1Q96MU8 473 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 ERGIC2Q96RQ1 377 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 CRACR2AQ9BSW2 395 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 MED10Q9BTT4 135 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 TRPV4Q9HBA0 871 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 IL21Q9HBE4 155 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 SIX2Q9NPC8 291 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 HCFC1R1Q9NWW0 138 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 TAB2Q9NYJ8 693 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 IL37Q9NZH6 218 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 CDH22Q9UJ99 828 aa14.53□□□□□ -0.08
LIMD1-203ENST00000465039 SLC38A8A6NNN8 435 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 C2CD4DB7Z1M9 353 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 ANHXE9PGG2 379 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 AP1G2O75843 785 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 SOAT2O75908 522 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 SETSIPP0DME0 302 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 SLC9A1P19634 815 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 GBP2P32456 591 aaPredicted RBP14.52□□□□□ -0.09
LIMD1-203ENST00000465039 BCAT1P54687 386 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 ZNF445P59923 1031 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 DDR2Q16832 855 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 HSP90AA4PQ58FG1 418 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 LRSAM1Q6UWE0 723 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 GET4Q7L5D6 327 aaPredicted RBP14.52□□□□□ -0.09
LIMD1-203ENST00000465039 FMNL3Q8IVF7 1028 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 SCN4BQ8IWT1 228 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 NUP93Q8N1F7 819 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 C12orf29Q8N999 325 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 ANKRD52Q8NB46 1076 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 RBBP8NLQ8NC74 664 aaPredicted RBP14.52□□□□□ -0.09
LIMD1-203ENST00000465039 LPIN3Q9BQK8 851 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 DUSP16Q9BY84 665 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 FBXO44Q9H4M3 255 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 CBX8Q9HC52 389 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 UBE2TQ9NPD8 197 aaPredicted RBP14.52□□□□□ -0.09
LIMD1-203ENST00000465039 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.52□□□□□ -0.092e-6■■■■■ 138
LIMD1-203ENST00000465039 FAM49BQ9NUQ9 324 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 PCDHB4Q9Y5E5 795 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 DOCK6Q96HP0 2047 aa14.52□□□□□ -0.09
LIMD1-203ENST00000465039 MUC3AQ02505 3323 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 GOLGA6L19H0YKK7 550 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 O00370 1275 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 PES1O00541 588 aaKnown RBP14.51□□□□□ -0.09
LIMD1-203ENST00000465039 TNFRSF10BO14763 440 aa14.51□□□□□ -0.09
LIMD1-203ENST00000465039 CCDC130P13994 396 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms