RNA–Protein interactions for RNA: ENST00000465036.1

UBR4-209, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-209ENST00000465036 TMA7Q9Y2S6 64 aaKnown RBP5.58□□□□□ -1.52
UBR4-209ENST00000465036 PRKAB1Q9Y478 270 aa5.58□□□□□ -1.52
UBR4-209ENST00000465036 GCC2Q8IWJ2 1684 aa5.58□□□□□ -1.52
UBR4-209ENST00000465036 RPRD2Q5VT52 1461 aaKnown RBP5.58□□□□□ -1.52
UBR4-209ENST00000465036 NPHP4O75161 1426 aaPredicted RBP5.57□□□□□ -1.52
UBR4-209ENST00000465036 POLR1AO95602 1720 aaPredicted RBP5.57□□□□□ -1.52
UBR4-209ENST00000465036 TMEM2Q9UHN6 1383 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 ZNF521Q96K83 1311 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 KLHL33A6NCF5 533 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 CCDC154A6NI56 674 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 PPP6CO00743 305 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 TUBB4AP04350 444 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 FTH1P19P0C7X4 201 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 JUPP14923 745 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 NDUFB7P17568 137 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 MALP21145 153 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 CNGA1P29973 690 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 TBCCQ15814 346 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 ETFDHQ16134 617 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 TMEM119Q4V9L6 283 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 ZNF618Q5T7W0 954 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 TAF2Q6P1X5 1199 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 PGM2L1Q6PCE3 622 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 WDR53Q7Z5U6 358 aaPredicted RBP5.57□□□□□ -1.52
UBR4-209ENST00000465036 YTHDF3Q7Z739 585 aaKnown RBP5.57□□□□□ -1.52
UBR4-209ENST00000465036 TTC7BQ86TV6 843 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 CNTD1Q8N815 330 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 PSD4Q8NDX1 1056 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 DENND1AQ8TEH3 1009 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 MKS1Q9NXB0 559 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 DKK3Q9UBP4 350 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 TBC1D30Q9Y2I9 924 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 ADGRB3O60242 1522 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 SLIT1O75093 1534 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 MED14O60244 1454 aa5.57□□□□□ -1.52
UBR4-209ENST00000465036 TISP43B9A030 160 aa5.56□□□□□ -1.52
UBR4-209ENST00000465036 ZNF213O14771 459 aa5.56□□□□□ -1.52
UBR4-209ENST00000465036 GJB1P08034 283 aa5.56□□□□□ -1.52
UBR4-209ENST00000465036 GNAI3P08754 354 aa5.56□□□□□ -1.52
UBR4-209ENST00000465036 ITGALP20701 1170 aa5.56□□□□□ -1.52
UBR4-209ENST00000465036 GNAI1P63096 354 aa5.56□□□□□ -1.52
UBR4-209ENST00000465036 SNAPC2Q13487 334 aa5.56□□□□□ -1.52
UBR4-209ENST00000465036 LAMB3Q13751 1172 aa5.56□□□□□ -1.52
UBR4-209ENST00000465036 RBM20Q5T481 1227 aaKnown RBP5.56□□□□□ -1.52
UBR4-209ENST00000465036 NOL8Q76FK4 1167 aaKnown RBP5.56□□□□□ -1.52
UBR4-209ENST00000465036 DTX2Q86UW9 622 aa5.56□□□□□ -1.52
UBR4-209ENST00000465036 FBXO41Q8TF61 875 aa5.56□□□□□ -1.52
UBR4-209ENST00000465036 FAXDC2Q96IV6 333 aa5.56□□□□□ -1.52
UBR4-209ENST00000465036 TMEM79Q9BSE2 394 aa5.56□□□□□ -1.52
UBR4-209ENST00000465036 SLC52A1Q9NWF4 448 aa5.56□□□□□ -1.52
UBR4-209ENST00000465036 SLC5A4Q9NY91 659 aa5.56□□□□□ -1.52
UBR4-209ENST00000465036 SH2B3Q9UQQ2 575 aa5.56□□□□□ -1.52
UBR4-209ENST00000465036 SCAF11Q99590 1463 aaKnown RBP5.56□□□□□ -1.52
UBR4-209ENST00000465036 IQGAP1P46940 1657 aa5.56□□□□□ -1.52
UBR4-209ENST00000465036 FNDC1Q4ZHG4 1894 aaPredicted RBP5.56□□□□□ -1.52
UBR4-209ENST00000465036 TMEM131LA2VDJ0 1609 aa5.56□□□□□ -1.52
UBR4-209ENST00000465036 MYO5BQ9ULV0 1848 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 STRCP1A6NGW2 1772 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 PRSS29PA6NIE9 313 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 TRIM38O00635 465 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 ADAMTS3O15072 1205 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 CLSTN1O94985 981 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 CD6P30203 668 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 ALDH9A1P49189 494 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 KIF22Q14807 665 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 SLC18B1Q6NT16 456 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 SLC4A10Q6U841 1118 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 SLC30A10Q6XR72 485 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 SLC29A4Q7RTT9 530 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 PPP1R32Q7Z5V6 425 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 KLHDC4Q8TBB5 520 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 BRIP1Q9BX63 1249 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 SMOC2Q9H3U7 446 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 MCM8Q9UJA3 840 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 ZFYVE9O95405 1425 aa5.55□□□□□ -1.52
UBR4-209ENST00000465036 ZNF785A8K8V0 405 aa5.54□□□□□ -1.52
UBR4-209ENST00000465036 PRRT4C9JH25 899 aa5.54□□□□□ -1.52
UBR4-209ENST00000465036 PPEF2O14830 753 aa5.54□□□□□ -1.52
UBR4-209ENST00000465036 MARCH6O60337 910 aa5.54□□□□□ -1.52
UBR4-209ENST00000465036 ARIH2O95376 493 aa5.54□□□□□ -1.52
UBR4-209ENST00000465036 ONECUT2O95948 504 aa5.54□□□□□ -1.52
UBR4-209ENST00000465036 FOXG1P55316 489 aaPredicted RBP5.54□□□□□ -1.52
UBR4-209ENST00000465036 DSC2Q02487 901 aa5.54□□□□□ -1.52
UBR4-209ENST00000465036 KHDC1Q4VXA5 237 aaKnown RBP5.54□□□□□ -1.52
UBR4-209ENST00000465036 PRAMEF17Q5VTA0 474 aa5.54□□□□□ -1.52
UBR4-209ENST00000465036 SFRP4Q6FHJ7 346 aaPredicted RBP5.54□□□□□ -1.52
UBR4-209ENST00000465036 DDX17Q92841 729 aaKnown RBP5.54□□□□□ -1.52
UBR4-209ENST00000465036 RAD54BQ9Y620 910 aa5.54□□□□□ -1.52
UBR4-209ENST00000465036 EID1Q9Y6B2 187 aa5.54□□□□□ -1.52
UBR4-209ENST00000465036 CLTCL1P53675 1640 aa5.54□□□□□ -1.52
UBR4-209ENST00000465036 SETD5Q9C0A6 1442 aa5.54□□□□□ -1.52
UBR4-209ENST00000465036 RIMS2Q9UQ26 1411 aa5.54□□□□□ -1.52
UBR4-209ENST00000465036 SPHKAPQ2M3C7 1700 aa5.54□□□□□ -1.52
UBR4-209ENST00000465036 RAB3GAP2Q9H2M9 1393 aa5.54□□□□□ -1.52
UBR4-209ENST00000465036 KDM5AP29375 1690 aaKnown RBP5.53□□□□□ -1.52
UBR4-209ENST00000465036 PCDHGA12O60330 932 aa5.53□□□□□ -1.52
UBR4-209ENST00000465036 TLR5O60602 858 aa5.53□□□□□ -1.52
UBR4-209ENST00000465036 TOP3BO95985 862 aaKnown RBP5.53□□□□□ -1.52
UBR4-209ENST00000465036 RARBP10826 455 aa5.53□□□□□ -1.52
UBR4-209ENST00000465036 IARSP41252 1262 aaKnown RBP5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms